ENSGALG00000043167


Gallus gallus

Features
Gene ID: ENSGALG00000043167
  
Biological name :TNFRSF11B
  
Synonyms : TNFRSF11B / tumor necrosis factor receptor superfamily member 11B precursor
  
Possible biological names infered from orthology : O00300 / O08712 / TNF receptor superfamily member 11b / tumor necrosis factor receptor superfamily, member 11b (osteoprotegerin)
  
Species: Gallus gallus
  
Chr. number: 2
Strand: -1
Band:
Gene start: 136408844
Gene end: 136425722
  
Corresponding Affymetrix probe sets: Gga.1812.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000055107
NCBI entrez gene - 378803     See in Manteia.
RefSeq - NM_001033641
RefSeq - XM_015283019
RefSeq Peptide - NP_001028813
swissprot - A0A1D5PQE4
Ensembl - ENSGALG00000043167
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tnfrsf11bENSDARG00000098377Danio rerio
 O00300ENSG00000164761Homo sapiens
 O08712ENSMUSG00000063727Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TNFRSF6B / TNF receptor superfamily member 6b / O95407*ENSGALG0000000610625
TNFRSF21 / tumor necrosis factor receptor superfamily member 21 precursor / O75509* / Q9EPU5* / TNF receptor superfamily member 21* / Tumor necrosis factor receptor superfamily member 21 *ENSGALG0000001671922
TNFRSF1B / tumor necrosis factor receptor superfamily member 1B precursor / P20333* / P25119* / TNF receptor superfamily member 1B* / tumor necrosis factor receptor superfamily, member 1b*ENSGALG0000003421318
TNFRSF11A / TNF receptor superfamily member 11a / O35305* / Q9Y6Q6* / Tumor necrosis factor receptor superfamily member 11A *ENSGALG0000004564215
CD40 / tumor necrosis factor receptor superfamily member 5 precursor / P25942* / P27512* / CD40 molecule* / Tumor necrosis factor receptor superfamily member 5 *ENSGALG0000000701514


Protein motifs (from Interpro)
Interpro ID Name
 IPR000488  Death domain
 IPR001368  TNFR/NGFR cysteine-rich region
 IPR011029  Death-like domain superfamily
 IPR011641  Tyrosine-protein kinase ephrin type A/B receptor-like
 IPR017371  Tumour necrosis factor receptor 11B
 IPR022323  Tumour necrosis factor receptor 11


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006915 apoptotic process IEA
 biological_processGO:0007165 signal transduction IEA
 biological_processGO:0030198 extracellular matrix organization IEA
 biological_processGO:0042489 negative regulation of odontogenesis of dentin-containing tooth IEA
 cellular_componentGO:0005615 extracellular space IEA


Pathways (from Reactome)
Pathway description
TNFs bind their physiological receptors


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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