ENSGALG00000006425


Gallus gallus

Features
Gene ID: ENSGALG00000006425
  
Biological name :SLC6A6
  
Synonyms : SLC6A6 / solute carrier family 6 member 6
  
Possible biological names infered from orthology : O35316 / P31641 / solute carrier family 6 (neurotransmitter transporter, taurine), member 6
  
Species: Gallus gallus
  
Chr. number: 12
Strand: 1
Band:
Gene start: 10969859
Gene end: 11019295
  
Corresponding Affymetrix probe sets: Gga.15268.1.A1_at (Chicken Array)   Gga.15268.1.S1_at (Chicken Array)   GgaAffx.3989.1.S1_at (Chicken Array)   GgaAffx.3989.2.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000062374
Ensembl peptide - ENSGALP00000010357
NCBI entrez gene - 416041     See in Manteia.
RefSeq - XM_015293097
RefSeq - XM_015293094
RefSeq - XM_015293095
RefSeq - XM_015293096
RefSeq - NM_001030600
RefSeq - XM_015293088
RefSeq - XM_015293089
RefSeq - XM_015293090
RefSeq - XM_015293091
RefSeq - XM_015293092
RefSeq - XM_015293093
RefSeq Peptide - NP_001025771
swissprot - F1P1E9
swissprot - A0A1L1RU72
Ensembl - ENSGALG00000006425
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 slc6a6aENSDARG00000012534Danio rerio
 slc6a6bENSDARG00000098438Danio rerio
 P31641ENSG00000131389Homo sapiens
 O35316ENSMUSG00000030096Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SLC6A13 / solute carrier family 6 member 13 / P31649* / Q9NSD5* / Sodium- and chloride-dependent GABA transporter 2 *ENSGALG0000001298559
SLC6A11 / solute carrier family 6 member 11 / P31650* / P48066* / Sodium- and chloride-dependent GABA transporter 3 *ENSGALG0000000487958
SLC6A12 / solute carrier family 6 member 12 / P48065* / solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12*ENSGALG0000001929057
P48029* / Q8VBW1* / SLC6A8* / solute carrier family 6 member 8* / solute carrier family 6 (neurotransmitter transporter, creatine), member 8*ENSGALG0000004141951
ENSGALG0000001929146
SLC6A1 / solute carrier family 6 member 1 / P30531* / P31648* / Sodium- and chloride-dependent GABA transporter 1 *ENSGALG0000000492144
SLC6A2 / solute carrier family 6 member 2 / O55192* / P23975* / solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2*ENSGALG0000000356042
SLC6A5 / solute carrier family 6 member 5 / Q9Y345* / solute carrier family 6 (neurotransmitter transporter, glycine), member 5*ENSGALG0000000390840
SLC6A4 / sodium-dependent serotonin transporter / P31645* / Q60857* / solute carrier family 6 member 4*ENSGALG0000000424640
SLC6A7 / solute carrier family 6 member 7 / Q6PGE7* / Q99884* / Sodium-dependent proline transporter *ENSGALG0000000567240
SLC6A14 / solute carrier family 6 member 14 / Q9JMA9* / Q9UN76* / Sodium- and chloride-dependent neutral and basic amino acid transporter B(0+) *ENSGALG0000000595738
SLC6A9 / sodium- and chloride-dependent glycine transporter 1 / P28571* / P48067* / solute carrier family 6 member 9*ENSGALG0000001009837
ENSGALG0000002798237


Protein motifs (from Interpro)
Interpro ID Name
 IPR000175  Sodium:neurotransmitter symporter
 IPR002434  Sodium:neurotransmitter symporter, taurine


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0003333 amino acid transmembrane transport IBA
 biological_processGO:0006836 neurotransmitter transport IEA
 biological_processGO:0015734 taurine transport IEA
 biological_processGO:0055085 transmembrane transport IEA
 cellular_componentGO:0005887 integral component of plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005328 neurotransmitter:sodium symporter activity IEA
 molecular_functionGO:0005368 taurine transmembrane transporter activity IEA
 molecular_functionGO:0005369 taurine:sodium symporter activity IEA
 molecular_functionGO:0015293 symporter activity IEA


Pathways (from Reactome)
Pathway description
Amino acid transport across the plasma membrane
Na+/Cl- dependent neurotransmitter transporters


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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