ENSGALG00000019290


Gallus gallus

Features
Gene ID: ENSGALG00000019290
  
Biological name :SLC6A12
  
Synonyms : SLC6A12 / solute carrier family 6 member 12
  
Possible biological names infered from orthology : P48065 / solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12
  
Species: Gallus gallus
  
Chr. number: 1
Strand: -1
Band:
Gene start: 60223646
Gene end: 60250104
  
Corresponding Affymetrix probe sets: GgaAffx.8228.2.S1_at (Chicken Array)   GgaAffx.8228.8.S1_at (Chicken Array)   GgaAffx.8228.8.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000021163
NCBI entrez gene - 418147     See in Manteia.
RefSeq - XM_015286905
RefSeq - XM_416378
swissprot - E1BQT4
Ensembl - ENSGALG00000019290
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 P48065ENSG00000111181Homo sapiens
 Slc6a12ENSMUSG00000030109Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SLC6A13 / solute carrier family 6 member 13 / P31649* / Q9NSD5* / Sodium- and chloride-dependent GABA transporter 2 *ENSGALG0000001298570
SLC6A11 / solute carrier family 6 member 11 / P31650* / P48066* / Sodium- and chloride-dependent GABA transporter 3 *ENSGALG0000000487967
SLC6A6 / solute carrier family 6 member 6 / O35316* / P31641* / solute carrier family 6 (neurotransmitter transporter, taurine), member 6*ENSGALG0000000642559
P48029* / Q8VBW1* / SLC6A8* / solute carrier family 6 member 8* / solute carrier family 6 (neurotransmitter transporter, creatine), member 8*ENSGALG0000004141953
ENSGALG0000001929151
SLC6A1 / solute carrier family 6 member 1 / P30531* / P31648* / Sodium- and chloride-dependent GABA transporter 1 *ENSGALG0000000492149
SLC6A5 / solute carrier family 6 member 5 / Q9Y345* / solute carrier family 6 (neurotransmitter transporter, glycine), member 5*ENSGALG0000000390843
SLC6A7 / solute carrier family 6 member 7 / Q6PGE7* / Q99884* / Sodium-dependent proline transporter *ENSGALG0000000567243
SLC6A9 / sodium- and chloride-dependent glycine transporter 1 / P28571* / P48067* / solute carrier family 6 member 9*ENSGALG0000001009843
SLC6A2 / solute carrier family 6 member 2 / O55192* / P23975* / solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2*ENSGALG0000000356041
SLC6A4 / sodium-dependent serotonin transporter / P31645* / Q60857* / solute carrier family 6 member 4*ENSGALG0000000424641
SLC6A14 / solute carrier family 6 member 14 / Q9JMA9* / Q9UN76* / Sodium- and chloride-dependent neutral and basic amino acid transporter B(0+) *ENSGALG0000000595741
ENSGALG0000002798240


Protein motifs (from Interpro)
Interpro ID Name
 IPR000175  Sodium:neurotransmitter symporter


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006836 neurotransmitter transport IEA
 biological_processGO:0055085 transmembrane transport IEA
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005215 transporter activity IBA
 molecular_functionGO:0005328 neurotransmitter:sodium symporter activity IEA
 molecular_functionGO:0015293 symporter activity IEA


Pathways (from Reactome)
Pathway description
Amino acid transport across the plasma membrane
Na+/Cl- dependent neurotransmitter transporters
Creatine metabolism
Reuptake of GABA


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr