ENSGALG00000006864


Gallus gallus

Features
Gene ID: ENSGALG00000006864
  
Biological name :COL24A1
  
Synonyms : COL24A1 / collagen type XXIV alpha 1 chain
  
Possible biological names infered from orthology : Collagen alpha-1(XXIV) chain / Q17RW2 / Q30D77
  
Species: Gallus gallus
  
Chr. number: 8
Strand: 1
Band:
Gene start: 16125706
Gene end: 16215909
  
Corresponding Affymetrix probe sets: Gga.12988.1.S1_at (Chicken Array)   Gga.14502.1.S1_at (Chicken Array)   GgaAffx.22604.1.S1_at (Chicken Array)   GgaAffx.22604.1.S1_s_at (Chicken Array)   GgaAffx.4581.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000011096
NCBI entrez gene - 424526     See in Manteia.
RefSeq - XM_015290843
RefSeq - XM_015290844
swissprot - F1NIP0
Ensembl - ENSGALG00000006864
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q17RW2ENSG00000171502Homo sapiens
 Q30D77ENSMUSG00000028197Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
COL5A1 / collagen alpha-1(V) chain precursor / P20908* / O88207* / Collagen alpha-1(V) chain * / collagen type V alpha 1 chain*ENSGALG0000000254643
COL3A1 / collagen type III alpha 1 chain / P02461* / P08121* / Collagen alpha-1(III) chain *ENSGALG0000003558442
COL1A2 / P02467 / Collagen alpha-2(I) chain / P08123* / Q01149* / collagen type I alpha 2 chain*ENSGALG0000000964141
COL5A2 / collagen type V alpha 2 chain / P05997* / Q3U962* / Collagen alpha-2(V) chain *ENSGALG0000003111241
COL11A1 / collagen type XI alpha 1 chain / P12107* / Q61245* / Collagen alpha-1(XI) chain *ENSGALG0000000518027


Protein motifs (from Interpro)
Interpro ID Name
 IPR008160  Collagen triple helix repeat


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002244 hematopoietic progenitor cell differentiation IEA


Pathways (from Reactome)
Pathway description
Collagen biosynthesis and modifying enzymes
Assembly of collagen fibrils and other multimeric structures
MET activates PTK2 signaling
Collagen chain trimerization


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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