ENSGALG00000007819


Gallus gallus

Features
Gene ID: ENSGALG00000007819
  
Biological name :PDZRN3
  
Synonyms : PDZ domain containing ring finger 3 / PDZRN3
  
Possible biological names infered from orthology : E3 ubiquitin-protein ligase PDZRN3 / Q69ZS0 / Q9UPQ7
  
Species: Gallus gallus
  
Chr. number: 12
Strand: -1
Band:
Gene start: 16642419
Gene end: 16762419
  
Corresponding Affymetrix probe sets: Gga.15903.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000012678
Ensembl peptide - ENSGALP00000051281
NCBI entrez gene - 416099     See in Manteia.
RefSeq - XM_414432
RefSeq - XM_015293224
swissprot - E1C0T3
swissprot - A0A1D5PES3
Ensembl - ENSGALG00000007819
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 E7FDW2ENSDARG00000073869Danio rerio
 pdzrn3aENSDARG00000073757Danio rerio
 PDZRN3ENSG00000121440Homo sapiens
 Pdzrn3ENSMUSG00000035357Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PDZRN4 / PDZ domain containing ring finger 4 / Q6ZMN7*ENSGALG0000000953049


Protein motifs (from Interpro)
Interpro ID Name
 IPR001478  PDZ domain
 IPR001841  Zinc finger, RING-type
 IPR003613  U box domain
 IPR008974  TRAF-like
 IPR013010  Zinc finger, SIAH-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR017907  Zinc finger, RING-type, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007528 neuromuscular junction development IEA
 biological_processGO:0016567 protein ubiquitination IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0031594 neuromuscular junction IEA
 molecular_functionGO:0004842 ubiquitin-protein transferase activity IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0061630 ubiquitin protein ligase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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