ENSGALG00000008465


Gallus gallus

Features
Gene ID: ENSGALG00000008465
  
Biological name :SORCS1
  
Synonyms : SORCS1 / sortilin related VPS10 domain containing receptor 1
  
Possible biological names infered from orthology : Q8WY21
  
Species: Gallus gallus
  
Chr. number: 6
Strand: -1
Band:
Gene start: 25131956
Gene end: 25417009
  
Corresponding Affymetrix probe sets: Gga.18874.1.S1_at (Chicken Array)   GgaAffx.22587.1.S1_at (Chicken Array)   GgaAffx.5324.1.S1_at (Chicken Array)   GgaAffx.5331.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000013781
Ensembl peptide - ENSGALP00000053617
NCBI entrez gene - 423885     See in Manteia.
RefSeq - XM_015288982
swissprot - A0A1D5PLA2
swissprot - F1P2Z2
Ensembl - ENSGALG00000008465
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LO017711.1ENSDARG00000112034Danio rerio
 Q8WY21ENSG00000108018Homo sapiens
 Sorcs1ENSMUSG00000043531Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SORCS3 / sortilin related VPS10 domain containing receptor 3 / Q8VI51* / Q9UPU3* / VPS10 domain-containing receptor SorCS3 *ENSGALG0000000843462
SORCS2 / sortilin related VPS10 domain containing receptor 2 / Q96PQ0* / Q9EPR5*ENSGALG0000001555441
SORL1 / sortilin-related receptor / O88307* / Q92673* / sortilin related receptor 1*ENSGALG0000000659821
SORT1 / sortilin 1 / Q6PHU5* / Q99523* / Sortilin *ENSGALG0000003357215


Protein motifs (from Interpro)
Interpro ID Name
 IPR000601  PKD domain
 IPR006581  VPS10
 IPR022409  PKD/Chitinase domain
 IPR031777  Sortilin, C-terminal
 IPR031778  Sortilin, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr