ENSGALG00000008434


Gallus gallus

Features
Gene ID: ENSGALG00000008434
  
Biological name :SORCS3
  
Synonyms : SORCS3 / sortilin related VPS10 domain containing receptor 3
  
Possible biological names infered from orthology : Q8VI51 / Q9UPU3 / VPS10 domain-containing receptor SorCS3
  
Species: Gallus gallus
  
Chr. number: 6
Strand: 1
Band:
Gene start: 24430441
Gene end: 24693839
  
Corresponding Affymetrix probe sets: GgaAffx.5315.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000013726
NCBI entrez gene - 423884     See in Manteia.
RefSeq - XM_421749
swissprot - F1P3Q2
Ensembl - ENSGALG00000008434
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SORCS3ENSDARG00000103535Danio rerio
 sorcs3bENSDARG00000077349Danio rerio
 Q9UPU3ENSG00000156395Homo sapiens
 Q8VI51ENSMUSG00000063434Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SORCS1 / sortilin related VPS10 domain containing receptor 1 / Q8WY21*ENSGALG0000000846562
SORCS2 / sortilin related VPS10 domain containing receptor 2 / Q96PQ0* / Q9EPR5*ENSGALG0000001555440
SORL1 / sortilin-related receptor / O88307* / Q92673* / sortilin related receptor 1*ENSGALG0000000659822
SORT1 / sortilin 1 / Q6PHU5* / Q99523* / Sortilin *ENSGALG0000003357215


Protein motifs (from Interpro)
Interpro ID Name
 IPR000601  PKD domain
 IPR006581  VPS10
 IPR031777  Sortilin, C-terminal
 IPR031778  Sortilin, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007612 learning IEA
 biological_processGO:0007613 memory IEA
 biological_processGO:1900452 regulation of long term synaptic depression IEA
 cellular_componentGO:0014069 postsynaptic density IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr