ENSDARG00000077349


Danio rerio

Features
Gene ID: ENSDARG00000077349
  
Biological name :sorcs3b
  
Synonyms : sorcs3b / sortilin related VPS10 domain containing receptor 3b
  
Possible biological names infered from orthology : Q8VI51 / Q9UPU3 / SORCS3 / sortilin related VPS10 domain containing receptor 3 / VPS10 domain-containing receptor SorCS3
  
Species: Danio rerio
  
Chr. number: 17
Strand: -1
Band:
Gene start: 20321323
Gene end: 20430177
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000101170
Ensembl peptide - ENSDARP00000127731
NCBI entrez gene - 556262     See in Manteia.
RefSeq - XM_021473096
swissprot - F1RAQ6
swissprot - X1WBY9
ZFIN ID - ZDB-GENE-131121-455
Ensembl - ENSDARG00000077349
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SORCS3ENSGALG00000008434Gallus gallus
 Q9UPU3ENSG00000156395Homo sapiens
 Q8VI51ENSMUSG00000063434Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SORCS3 / sortilin related VPS10 domain containing receptor 3 / Q9UPU3*ENSDARG0000010353548
sorcs2 / sortilin-related VPS10 domain containing receptor 2 / Q96PQ0* / Q9EPR5*ENSDARG0000007746535
sorl1 / sortilin-related receptor, L(DLR class) A repeats containing / Q92673* / O88307* / Sortilin-related receptor * / sortilin related receptor 1*ENSDARG0000001389222
LO017711.1 / Q8WY21* / SORCS1* / sortilin related VPS10 domain containing receptor 1*ENSDARG0000011203418
sort1b / sortilin 1b / SORT1* / Q99523* / Q6PHU5* / Sortilin * / sortilin 1*ENSDARG0000005625215
sort1a / sortilin 1a / SORT1* / Q99523* / Q6PHU5* / Sortilin * / sortilin 1*ENSDARG0000002940214
si:dkey-159a18.1ENSDARG000000561458


Protein motifs (from Interpro)
Interpro ID Name
 IPR000601  PKD domain
 IPR006581  VPS10
 IPR013783  Immunoglobulin-like fold
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR022409  PKD/Chitinase domain
 IPR031777  Sortilin, C-terminal
 IPR031778  Sortilin, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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