ENSDARG00000077465


Danio rerio

Features
Gene ID: ENSDARG00000077465
  
Biological name :sorcs2
  
Synonyms : sorcs2 / sortilin-related VPS10 domain containing receptor 2
  
Possible biological names infered from orthology : Q96PQ0 / Q9EPR5
  
Species: Danio rerio
  
Chr. number: 7
Strand: 1
Band:
Gene start: 39757608
Gene end: 40057772
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000101400
Ensembl peptide - ENSDARP00000149431
NCBI entrez gene - 100330371     See in Manteia.
swissprot - E7FD83
ZFIN ID - ZDB-GENE-130530-825
Ensembl - ENSDARG00000077465
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SORCS2ENSGALG00000015554Gallus gallus
 Q96PQ0ENSG00000184985Homo sapiens
 Q9EPR5ENSMUSG00000029093Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
sorcs3b / sortilin related VPS10 domain containing receptor 3b / Q9UPU3* / SORCS3* / Q8VI51* / VPS10 domain-containing receptor SorCS3 * / sortilin related VPS10 domain containing receptor 3*ENSDARG0000007734937
SORCS3 / sortilin related VPS10 domain containing receptor 3 / Q9UPU3*ENSDARG0000010353536
sorl1 / sortilin-related receptor, L(DLR class) A repeats containing / Q92673* / O88307* / Sortilin-related receptor * / sortilin related receptor 1*ENSDARG0000001389223
sort1a / sortilin 1a / SORT1* / Q99523* / Q6PHU5* / Sortilin * / sortilin 1*ENSDARG0000002940216
sort1b / sortilin 1b / SORT1* / Q99523* / Q6PHU5* / Sortilin * / sortilin 1*ENSDARG0000005625216
LO017711.1 / Q8WY21* / SORCS1* / sortilin related VPS10 domain containing receptor 1*ENSDARG0000011203414
si:dkey-159a18.1ENSDARG0000005614510


Protein motifs (from Interpro)
Interpro ID Name
 IPR000601  PKD domain
 IPR006581  VPS10
 IPR013783  Immunoglobulin-like fold
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR031777  Sortilin, C-terminal
 IPR031778  Sortilin, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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