ENSDARG00000056145


Danio rerio

Features
Gene ID: ENSDARG00000056145
  
Biological name :si:dkey-159a18.1
  
Synonyms : si:dkey-159a18.1
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 4
Strand: -1
Band:
Gene start: 20110921
Gene end: 20118468
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000073048
Ensembl peptide - ENSDARP00000114644
swissprot - F1QI30
swissprot - F1QQY3
ZFIN ID - ZDB-GENE-041210-204
Ensembl - ENSDARG00000056145
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
sort1a / sortilin 1a / SORT1* / Q99523* / Q6PHU5* / Sortilin * / sortilin 1*ENSDARG0000002940250
sort1b / sortilin 1b / SORT1* / Q99523* / Q6PHU5* / Sortilin * / sortilin 1*ENSDARG0000005625248
sorl1 / sortilin-related receptor, L(DLR class) A repeats containing / Q92673* / O88307* / Sortilin-related receptor * / sortilin related receptor 1*ENSDARG0000001389226
sorcs2 / sortilin-related VPS10 domain containing receptor 2 / Q96PQ0* / Q9EPR5*ENSDARG0000007746526
sorcs3b / sortilin related VPS10 domain containing receptor 3b / Q9UPU3* / SORCS3* / Q8VI51* / VPS10 domain-containing receptor SorCS3 * / sortilin related VPS10 domain containing receptor 3*ENSDARG0000007734923
SORCS3 / sortilin related VPS10 domain containing receptor 3 / Q9UPU3*ENSDARG0000010353522
LO017711.1 / Q8WY21* / SORCS1* / sortilin related VPS10 domain containing receptor 1*ENSDARG000001120343


Protein motifs (from Interpro)
Interpro ID Name
 IPR006581  VPS10
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR031777  Sortilin, C-terminal
 IPR031778  Sortilin, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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