ENSGALG00000008519


Gallus gallus

Features
Gene ID: ENSGALG00000008519
  
Biological name :NR2C2
  
Synonyms : NR2C2 / nuclear receptor subfamily 2 group C member 2
  
Possible biological names infered from orthology : P49116 / P49117
  
Species: Gallus gallus
  
Chr. number: 12
Strand: -1
Band:
Gene start: 19784606
Gene end: 19809996
  
Corresponding Affymetrix probe sets: Gga.15703.1.S1_at (Chicken Array)   Gga.15703.2.S1_at (Chicken Array)   Gga.15703.2.S1_s_at (Chicken Array)   Gga.164.1.A1_at (Chicken Array)   Gga.164.1.S1_s_at (Chicken Array)   GgaAffx.22615.2.S1_s_at (Chicken Array)   GgaAffx.5376.1.A1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000055972
Ensembl peptide - ENSGALP00000013860
NCBI entrez gene - 395253     See in Manteia.
RefSeq - XM_414462
RefSeq - XM_015293167
RefSeq - XM_015293168
RefSeq - XM_004944725
RefSeq - XM_004944726
RefSeq - XM_004944727
RefSeq - XM_015293165
RefSeq - XM_015293166
swissprot - F1P0B9
swissprot - A0A1D5PST3
Ensembl - ENSGALG00000008519
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 nr2c2ENSDARG00000042477Danio rerio
 NR2C2ENSG00000177463Homo sapiens
 Nr2c2ENSMUSG00000005893Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
NR2C1 / nuclear receptor subfamily 2 group C member 1 / P13056* / Q505F1*ENSGALG0000001132756
NR2F1 / nuclear receptor subfamily 2 group F member 1 / P10589*ENSGALG0000002790725
NR2F2 / COUP transcription factor 2 / P24468* / P43135* / nuclear receptor subfamily 2 group F member 2*ENSGALG0000000700024
NR2F6 / nuclear receptor subfamily 2 group F member 6 / P10588* / P43136*ENSGALG0000004301023
RXRG / retinoic acid receptor RXR-gamma / P28705* / P48443* / retinoid X receptor gamma*ENSGALG0000004073022
NR2E1 / nuclear receptor subfamily 2 group E member 1 / Q64104* / Q9Y466*ENSGALG0000001530520
HNF4G / hepatocyte nuclear factor 4 gamma / Q14541*ENSGALG0000004262120
NR2E3 / photoreceptor-specific nuclear receptor / Q9QXZ7* / Q9Y5X4* / nuclear receptor subfamily 2 group E member 3*ENSGALG0000000209319
HNF4A / hepatocyte nuclear factor 4-alpha / P41235* / P49698*ENSGALG0000000428518
HNF4beta / hepatic nuclear factor 4beta ENSGALG0000000570818
RXRA / retinoid X receptor alpha / P19793* / P28700*ENSGALG0000004205512


Protein motifs (from Interpro)
Interpro ID Name
 IPR000536  Nuclear hormone receptor, ligand-binding domain
 IPR001628  Zinc finger, nuclear hormone receptor-type
 IPR001723  Nuclear hormone receptor
 IPR003068  Transcription factor COUP
 IPR013088  Zinc finger, NHR/GATA-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 biological_processGO:0030522 intracellular receptor signaling pathway IEA
 biological_processGO:0043401 steroid hormone mediated signaling pathway IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 molecular_functionGO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding IEA
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0001077 transcriptional activator activity, RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0001228 transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0003707 steroid hormone receptor activity IEA
 molecular_functionGO:0004879 nuclear receptor activity IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0046982 protein heterodimerization activity IEA


Pathways (from Reactome)
Pathway description
Nuclear Receptor transcription pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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