ENSGALG00000042621


Gallus gallus

Features
Gene ID: ENSGALG00000042621
  
Biological name :HNF4G
  
Synonyms : hepatocyte nuclear factor 4 gamma / HNF4G
  
Possible biological names infered from orthology : Q14541
  
Species: Gallus gallus
  
Chr. number: 2
Strand: 1
Band:
Gene start: 119132532
Gene end: 119162556
  
Corresponding Affymetrix probe sets: GgaAffx.9989.3.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000049839
Ensembl peptide - ENSGALP00000053757
NCBI entrez gene - 428364     See in Manteia.
RefSeq - XM_425924
RefSeq - XM_015282872
RefSeq - XM_015282873
RefSeq - XM_015282870
RefSeq - XM_015282871
swissprot - A0A1D5PLN7
swissprot - A0A1D5PAS5
Ensembl - ENSGALG00000042621
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 hnf4gENSDARG00000071565Danio rerio
 HNF4GENSG00000164749Homo sapiens
 Hnf4gENSMUSG00000017688Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
HNF4A / hepatocyte nuclear factor 4-alpha / P41235* / P49698*ENSGALG0000000428572
HNF4beta / hepatic nuclear factor 4beta ENSGALG0000000570866
RXRG / retinoic acid receptor RXR-gamma / P28705* / P48443* / retinoid X receptor gamma*ENSGALG0000004073032
NR2F2 / COUP transcription factor 2 / P24468* / P43135* / nuclear receptor subfamily 2 group F member 2*ENSGALG0000000700029
NR2F1 / nuclear receptor subfamily 2 group F member 1 / P10589*ENSGALG0000002790729
NR2F6 / nuclear receptor subfamily 2 group F member 6 / P10588* / P43136*ENSGALG0000004301029
NR2C2 / nuclear receptor subfamily 2 group C member 2 / P49116* / P49117*ENSGALG0000000851928
NR2C1 / nuclear receptor subfamily 2 group C member 1 / P13056* / Q505F1*ENSGALG0000001132726
NR2E1 / nuclear receptor subfamily 2 group E member 1 / Q64104* / Q9Y466*ENSGALG0000001530526
NR2E3 / photoreceptor-specific nuclear receptor / Q9QXZ7* / Q9Y5X4* / nuclear receptor subfamily 2 group E member 3*ENSGALG0000000209324
RXRA / retinoid X receptor alpha / P19793* / P28700*ENSGALG0000004205515


Protein motifs (from Interpro)
Interpro ID Name
 IPR000536  Nuclear hormone receptor, ligand-binding domain
 IPR001628  Zinc finger, nuclear hormone receptor-type
 IPR001723  Nuclear hormone receptor
 IPR003068  Transcription factor COUP
 IPR013088  Zinc finger, NHR/GATA-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0030522 intracellular receptor signaling pathway IEA
 biological_processGO:0043401 steroid hormone mediated signaling pathway IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0003707 steroid hormone receptor activity IEA
 molecular_functionGO:0004879 nuclear receptor activity IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Nuclear Receptor transcription pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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