ENSGALG00000008749


Gallus gallus

Features
Gene ID: ENSGALG00000008749
  
Biological name :POLR3F
  
Synonyms : POLR3F / RNA polymerase III subunit F
  
Possible biological names infered from orthology : polymerase (RNA) III (DNA directed) polypeptide F / Q921X6 / Q9H1D9
  
Species: Gallus gallus
  
Chr. number: 3
Strand: -1
Band:
Gene start: 15399378
Gene end: 15406966
  
Corresponding Affymetrix probe sets: Gga.5581.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000014222
Ensembl peptide - ENSGALP00000047516
NCBI entrez gene - 416723     See in Manteia.
RefSeq - NM_001199401
RefSeq Peptide - NP_001186330
swissprot - E1BU41
swissprot - A0A1D5P4A8
Ensembl - ENSGALG00000008749
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 polr3fENSDARG00000012572Danio rerio
 POLR3FENSG00000132664Homo sapiens
 Polr3fENSMUSG00000027427Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR007832  RNA polymerase Rpc34
 IPR011991  ArsR-like helix-turn-helix domain
 IPR016049  RNA polymerase Rpc34-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006383 transcription by RNA polymerase III IEA
 biological_processGO:0032728 positive regulation of interferon-beta production IEA
 biological_processGO:0045089 positive regulation of innate immune response IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005666 DNA-directed RNA polymerase III complex IEA
 molecular_functionGO:0001056 RNA polymerase III activity IBA
 molecular_functionGO:0003690 double-stranded DNA binding IEA
 molecular_functionGO:0003899 DNA-directed 5"-3" RNA polymerase activity IEA


Pathways (from Reactome)
Pathway description
RNA Polymerase III Transcription Initiation From Type 1 Promoter
RNA Polymerase III Transcription Initiation From Type 2 Promoter
RNA Polymerase III Transcription Initiation From Type 3 Promoter


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000014650 POLR3G / RNA polymerase III subunit G / O15318* / Q6NXY9* / DNA-directed RNA polymerase III subunit RPC7 *  / complex






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr