ENSGALG00000011566


Gallus gallus

Features
Gene ID: ENSGALG00000011566
  
Biological name :GYPC
  
Synonyms : glycophorin C (Gerbich blood group) / GYPC
  
Possible biological names infered from orthology : glycophorin C / P04921 / Q78HU7
  
Species: Gallus gallus
  
Chr. number: 7
Strand: -1
Band:
Gene start: 24152194
Gene end: 24178854
  
Corresponding Affymetrix probe sets: Gga.10145.1.S1_a_at (Chicken Array)   GgaAffx.23593.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000056646
Ensembl peptide - ENSGALP00000037276
NCBI entrez gene - 424230     See in Manteia.
RefSeq - NM_001004407
RefSeq Peptide - NP_001004407
swissprot - F1NCK8
swissprot - A0A1D5PUP2
Ensembl - ENSGALG00000011566
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 gypcENSDARG00000041546Danio rerio
 GYPCENSG00000136732Homo sapiens
 GypcENSMUSG00000090523Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR003585  Neurexin/syndecan/glycophorin C


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules IBA
 biological_processGO:0007157 heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules IBA
 biological_processGO:0008037 cell recognition IBA
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0005913 cell-cell adherens junction IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030863 cortical cytoskeleton IEA
 molecular_functionGO:0005102 signaling receptor binding IBA
 molecular_functionGO:0042803 protein homodimerization activity IBA
 molecular_functionGO:0050839 cell adhesion molecule binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr