ENSMUSG00000090523


Mus musculus
membraneGypcadhesioncellplasmaviamoleculescell-cellintegralcomponentbindingneurexinsyndecanglycophorinchomophilicheterophilicrecognitionadherensjunctioncorticalcytoskeletonsignalingreceptorproteinhomodimerizationactivitymolecule

Features
Gene ID: ENSMUSG00000090523
  
Biological name :Gypc
  
Synonyms : glycophorin C / Gypc / Q78HU7
  
Possible biological names infered from orthology : glycophorin C (Gerbich blood group) / P04921
  
Species: Mus musculus
  
Chr. number: 18
Strand: -1
Band: B1
Gene start: 32528322
Gene end: 32560034
  
Corresponding Affymetrix probe sets: 10458028 (MoGene1.0st)   1423878_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000128514
Ensembl peptide - ENSMUSP00000133874
Ensembl peptide - ENSMUSP00000134317
NCBI entrez gene - 71683     See in Manteia.
MGI - MGI:1098566
RefSeq - NM_001347610
RefSeq - XM_006526273
RefSeq - NM_001048207
RefSeq Peptide - NP_001041672
RefSeq Peptide - NP_001334539
swissprot - F7D1I5
swissprot - Q78HU7
swissprot - G3UXY6
Ensembl - ENSMUSG00000090523
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 gypcENSDARG00000041546Danio rerio
 GYPCENSGALG00000011566Gallus gallus
 GYPCENSG00000136732Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR003585  Neurexin/syndecan/glycophorin C


Gene Ontology (GO)
cell adhesioncell recognitioncell adhesioncell recognitioncell adhesioncell recognitioncell adhesioncell recognitioncell adhesioncell recognitioncell adhesioncell recognitioncell adhesioncell recognitioncell adhesioncell recognitioncell adhesioncell recognitioncell adhesioncell recognitioncell adhesioncell adhesioncell recognitioncell recognition
protein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein binding
cellmembranecell junctionorganellecellmembranecell junctionorganellecellmembranecell junctionorganellecellmembranecell junctionorganellecellmembranecell junctionorganellecellmembranecell junctionorganellecellmembranecell junctionorganellecellmembranecell junctionorganellecellmembranecell junctionorganellecellmembranecell junctionorganellecellcellmembranemembranecell junctioncell junctionorganelleorganelle
TypeGO IDTermEv.Code
 biological_processGO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules IBA
 biological_processGO:0007157 heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules IBA
 biological_processGO:0008037 cell recognition IBA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0005913 cell-cell adherens junction IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030863 cortical cytoskeleton IEA
 molecular_functionGO:0005102 signaling receptor binding IBA
 molecular_functionGO:0042803 protein homodimerization activity IBA
 molecular_functionGO:0050839 cell adhesion molecule binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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