ENSGALG00000012033


Gallus gallus

Features
Gene ID: ENSGALG00000012033
  
Biological name :SGSM3
  
Synonyms : SGSM3 / small G protein signaling modulator 3
  
Possible biological names infered from orthology : Q8VCZ6 / Q96HU1
  
Species: Gallus gallus
  
Chr. number: 1
Strand: -1
Band:
Gene start: 50098087
Gene end: 50115325
  
Corresponding Affymetrix probe sets: GgaAffx.7634.2.S1_s_at (Chicken Array)   GgaAffx.7634.3.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000019611
NCBI entrez gene - 418008     See in Manteia.
RefSeq - XM_015288881
RefSeq - XM_015288889
RefSeq - XM_015288894
RefSeq - XM_015288899
RefSeq - XM_015288904
RefSeq - XM_015288870
swissprot - E1BR02
Ensembl - ENSGALG00000012033
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sgsm3ENSDARG00000019038Danio rerio
 SGSM3ENSG00000100359Homo sapiens
 Sgsm3ENSMUSG00000042303Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TBC1D9 / TBC1 domain family member 9 / Q3UYK3* / Q6ZT07*ENSGALG0000000985521
TBC1D9B / TBC1 domain family member 9B / Q5SVR0* / Q66K14*ENSGALG0000000585620
TBC1D8B / TBC1 domain family member 8B / A3KGB4* / Q0IIM8*ENSGALG0000000904019
TBC1D8 / TBC1 domain family member 8 / O95759* / Q9Z1A9* / Mus musculus TBC1 domain family, member 8 (Tbc1d8), transcript variant 3, mRNA.*ENSGALG0000001677619
TBC1D2 / TBC1 domain family member 2 / B1AVH7* / Q9BYX2* / TBC1 domain family member 2A *ENSGALG0000000194418
TBC1D2B / TBC1 domain family member 2B / Q3U0J8* / Q9UPU7*ENSGALG0000000332217
TBC1D30 / TBC1 domain family member 30 / Q69ZT9* / Q9Y2I9*ENSGALG0000000985914


Protein motifs (from Interpro)
Interpro ID Name
 IPR000195  Rab-GTPase-TBC domain
 IPR001452  SH3 domain
 IPR004012  RUN domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IBA
 biological_processGO:0031338 regulation of vesicle fusion IBA
 biological_processGO:0032483 regulation of Rab protein signal transduction IEA
 biological_processGO:0032486 Rap protein signal transduction IEA
 biological_processGO:0043547 positive regulation of GTPase activity IEA
 biological_processGO:0045732 positive regulation of protein catabolic process IEA
 biological_processGO:0048227 plasma membrane to endosome transport IEA
 biological_processGO:0090630 activation of GTPase activity IBA
 cellular_componentGO:0005622 intracellular IBA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005921 gap junction IEA
 cellular_componentGO:0012505 endomembrane system IBA
 molecular_functionGO:0005096 GTPase activator activity IEA
 molecular_functionGO:0017137 Rab GTPase binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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