ENSGALG00000016776


Gallus gallus

Features
Gene ID: ENSGALG00000016776
  
Biological name :TBC1D8
  
Synonyms : TBC1D8 / TBC1 domain family member 8
  
Possible biological names infered from orthology : Mus musculus TBC1 domain family, member 8 (Tbc1d8), transcript variant 3, mRNA. / O95759 / Q9Z1A9
  
Species: Gallus gallus
  
Chr. number: 1
Strand: -1
Band:
Gene start: 133434844
Gene end: 133489335
  
Corresponding Affymetrix probe sets: Gga.10248.1.S1_at (Chicken Array)   Gga.10877.1.S1_at (Chicken Array)   Gga.10877.1.S1_s_at (Chicken Array)   Gga.10877.2.S1_s_at (Chicken Array)   Gga.5542.1.S1_at (Chicken Array)   Gga.5542.2.S1_at (Chicken Array)   GgaAffx.25068.1.S1_at (Chicken Array)   GgaAffx.25068.3.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000027032
NCBI entrez gene - 428012     See in Manteia.
RefSeq - XM_004938504
RefSeq - XM_425583
swissprot - F1P4V5
Ensembl - ENSGALG00000016776
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LO018176.1ENSDARG00000104493Danio rerio
 O95759ENSG00000204634Homo sapiens
 Q9Z1A9ENSMUSG00000003134Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TBC1D8B / TBC1 domain family member 8B / A3KGB4* / Q0IIM8*ENSGALG0000000904052
TBC1D9B / TBC1 domain family member 9B / Q5SVR0* / Q66K14*ENSGALG0000000585650
TBC1D9 / TBC1 domain family member 9 / Q3UYK3* / Q6ZT07*ENSGALG0000000985550
TBC1D2 / TBC1 domain family member 2 / B1AVH7* / Q9BYX2* / TBC1 domain family member 2A *ENSGALG0000000194413
TBC1D2B / TBC1 domain family member 2B / Q3U0J8* / Q9UPU7*ENSGALG0000000332213
TBC1D30 / TBC1 domain family member 30 / Q69ZT9* / Q9Y2I9*ENSGALG0000000985912
SGSM3 / small G protein signaling modulator 3 / Q8VCZ6* / Q96HU1*ENSGALG0000001203312


Protein motifs (from Interpro)
Interpro ID Name
 IPR000195  Rab-GTPase-TBC domain
 IPR004182  GRAM domain
 IPR011992  EF-hand domain pair


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IBA
 biological_processGO:0031338 regulation of vesicle fusion IBA
 biological_processGO:0090630 activation of GTPase activity IBA
 cellular_componentGO:0005622 intracellular IBA
 cellular_componentGO:0012505 endomembrane system IBA
 molecular_functionGO:0005096 GTPase activator activity IBA
 molecular_functionGO:0017137 Rab GTPase binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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