ENSGALG00000009040


Gallus gallus

Features
Gene ID: ENSGALG00000009040
  
Biological name :TBC1D8B
  
Synonyms : TBC1D8B / TBC1 domain family member 8B
  
Possible biological names infered from orthology : A3KGB4 / Q0IIM8
  
Species: Gallus gallus
  
Chr. number: 4
Strand: 1
Band:
Gene start: 17438835
Gene end: 17470341
  
Corresponding Affymetrix probe sets: Gga.10133.1.S1_s_at (Chicken Array)   Gga.10153.1.S1_at (Chicken Array)   GgaAffx.5712.2.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000054517
Ensembl peptide - ENSGALP00000014700
NCBI entrez gene - 422383     See in Manteia.
RefSeq - XM_015278641
RefSeq - XM_015278640
swissprot - F1NGZ2
swissprot - A0A1D5PNS3
Ensembl - ENSGALG00000009040
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 B0R0W9ENSDARG00000062192Danio rerio
 Q0IIM8ENSG00000133138Homo sapiens
 A3KGB4ENSMUSG00000042473Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TBC1D8 / TBC1 domain family member 8 / O95759* / Q9Z1A9* / Mus musculus TBC1 domain family, member 8 (Tbc1d8), transcript variant 3, mRNA.*ENSGALG0000001677653
TBC1D9 / TBC1 domain family member 9 / Q3UYK3* / Q6ZT07*ENSGALG0000000985552
TBC1D9B / TBC1 domain family member 9B / Q5SVR0* / Q66K14*ENSGALG0000000585650
TBC1D2 / TBC1 domain family member 2 / B1AVH7* / Q9BYX2* / TBC1 domain family member 2A *ENSGALG0000000194413
TBC1D2B / TBC1 domain family member 2B / Q3U0J8* / Q9UPU7*ENSGALG0000000332213
SGSM3 / small G protein signaling modulator 3 / Q8VCZ6* / Q96HU1*ENSGALG0000001203313
TBC1D30 / TBC1 domain family member 30 / Q69ZT9* / Q9Y2I9*ENSGALG0000000985912


Protein motifs (from Interpro)
Interpro ID Name
 IPR000195  Rab-GTPase-TBC domain
 IPR002048  EF-hand domain
 IPR004182  GRAM domain
 IPR011992  EF-hand domain pair


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IBA
 biological_processGO:0031338 regulation of vesicle fusion IBA
 biological_processGO:0090630 activation of GTPase activity IBA
 cellular_componentGO:0005622 intracellular IBA
 cellular_componentGO:0012505 endomembrane system IBA
 molecular_functionGO:0005096 GTPase activator activity IBA
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0017137 Rab GTPase binding IBA


Pathways (from Reactome)
Pathway description
Golgi Associated Vesicle Biogenesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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