ENSGALG00000012290


Gallus gallus

Features
Gene ID: ENSGALG00000012290
  
Biological name :SOX10
  
Synonyms : Q9W757 / SOX10 / Transcription factor SOX-10
  
Possible biological names infered from orthology : P56693 / Q04888 / SRY-box 10
  
Species: Gallus gallus
  
Chr. number: 1
Strand: 1
Band:
Gene start: 51089596
Gene end: 51098755
  
Corresponding Affymetrix probe sets: Gga.4428.1.S2_s_at (Chicken Array)   GgaAffx.20591.2.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000020056
NCBI entrez gene - 395573     See in Manteia.
RefSeq - XM_015284463
RefSeq - NM_204792
RefSeq Peptide - NP_990123
swissprot - R9PXP0
swissprot - Q9W757
Ensembl - ENSGALG00000012290
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sox10ENSDARG00000077467Danio rerio
 SOX10ENSG00000100146Homo sapiens
 Sox10ENSMUSG00000033006Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SOX9 / P48434 / Transcription factor SOX-9 / Q04887* / P48436* / SRY-box 9*ENSGALG0000000438658
SOX8 / transcription factor SOX-8 / Q04886* / P57073* / SRY-box 8* / SRY (sex determining region Y)-box 8*ENSGALG0000000526349
SOX17* / Q61473* / Q9H6I2* / SRY-box 17* / Transcription factor SOX-17 *ENSGALG0000003299421
SOX17 / transcription factor SOX-17 / Q61473* / Q9H6I2* / SRY-box 17*ENSGALG0000003285120
SOX18 / transcription factor SOX-18 / P35713* / P43680* / SRY-box 18*ENSGALG0000003411820
SOX4 / transcription factor SOX-4 / Q06831* / Q06945* / SRY-box 4*ENSGALG0000003649720
SOX7* / Q9BT81* / P40646* / SRY-box 7* / AC105001.2* / SRY (sex determining region Y)-box 7*ENSGALG0000004129618
SOX1 / transcription factor SOX-1 / O00570* / P53783* / SRY-box 1*ENSGALG0000003035317
SOX2 / P48430 / Transcription factor SOX-2 / P48431* / SRY-box 2*ENSGALG0000004346017
SOX12 / SRY-box 12 / O15370* / Q04890* / Transcription factor SOX-12 *ENSGALG0000003595116
SOX21 / Q9W7R5 / Transcription factor SOX-21 / Q9Y651* / Q811W0* / SRY-box 21*ENSGALG0000003515715
SOX14 / Q9W7R6 / Transcription factor SOX-14 / Q04892* / O95416* / SRY-box 14*ENSGALG0000003735214


Protein motifs (from Interpro)
Interpro ID Name
 IPR009071  High mobility group box domain
 IPR022151  Sox developmental protein N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 biological_processGO:0014003 oligodendrocyte development ISS
 biological_processGO:0022010 central nervous system myelination ISS
 biological_processGO:0045893 positive regulation of transcription, DNA-templated ISS
 biological_processGO:0048709 oligodendrocyte differentiation ISS
 biological_processGO:0060959 cardiac neuron development IEP
 cellular_componentGO:0005623 cell IDA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0003677 DNA binding ISS
 molecular_functionGO:0003700 DNA-binding transcription factor activity ISS
 molecular_functionGO:0042802 identical protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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