ENSGALG00000013414


Gallus gallus

Features
Gene ID: ENSGALG00000013414
  
Biological name :PDLIM3
  
Synonyms : PDLIM3 / PDZ and LIM domain protein 3
  
Possible biological names infered from orthology : O70209 / PDZ and LIM domain 3 / Q53GG5
  
Species: Gallus gallus
  
Chr. number: 4
Strand: -1
Band:
Gene start: 61452591
Gene end: 61473492
  
Corresponding Affymetrix probe sets: Gga.343.1.S1_at (Chicken Array)   Gga.344.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000021842
NCBI entrez gene - 414873     See in Manteia.
RefSeq - NM_001001764
RefSeq - XM_015285427
RefSeq - XM_015285428
RefSeq Peptide - NP_001001764
swissprot - F1NHA9
Ensembl - ENSGALG00000013414
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pdlim3aENSDARG00000011023Danio rerio
 pdlim3bENSDARG00000014248Danio rerio
 PDLIM3ENSG00000154553Homo sapiens
 O70209ENSMUSG00000031636Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PDLIM1 / PDZ and LIM domain 1 / O00151* / O70400* / PDZ and LIM domain protein 1 *ENSGALG0000000542250
PDLIM4 / Q9PW72 / PDZ and LIM domain protein 4 / P50479* / P70271* / PDZ and LIM domain 4*ENSGALG0000003987249


Protein motifs (from Interpro)
Interpro ID Name
 IPR001478  PDZ domain
 IPR001781  Zinc finger, LIM-type
 IPR006643  Zasp-like motif
 IPR031847  Domain of unknown function DUF4749


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007015 actin filament organization IEA
 biological_processGO:0007507 heart development IEA
 cellular_componentGO:0015629 actin cytoskeleton IEA
 molecular_functionGO:0008092 cytoskeletal protein binding IEA
 molecular_functionGO:0008307 structural constituent of muscle IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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