ENSGALG00000014743


Gallus gallus

Features
Gene ID: ENSGALG00000014743
  
Biological name :RNF180
  
Synonyms : ring finger protein 180 / RNF180
  
Possible biological names infered from orthology : E3 ubiquitin-protein ligase RNF180 / Q3U827 / Q86T96
  
Species: Gallus gallus
  
Chr. number: Z
Strand: 1
Band:
Gene start: 20054082
Gene end: 20125308
  
Corresponding Affymetrix probe sets: GgaAffx.9361.1.S1_at (Chicken Array)   GgaAffx.9361.2.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000052271
Ensembl peptide - ENSGALP00000023728
NCBI entrez gene - 101747752     See in Manteia.
RefSeq - XM_015277602
RefSeq - XM_015277600
RefSeq - XM_015277601
RefSeq - XM_004937273
RefSeq - XM_004937275
swissprot - F1NAZ1
swissprot - A0A1D5PHJ1
Ensembl - ENSGALG00000014743
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rnf180ENSDARG00000057101Danio rerio
 RNF180ENSDARG00000073720Danio rerio
 Q86T96ENSG00000164197Homo sapiens
 Q3U827ENSMUSG00000021720Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001841  Zinc finger, RING-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR017907  Zinc finger, RING-type, conserved site
 IPR033263  E3 ubiquitin-protein ligase RNF180


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000209 protein polyubiquitination IBA
 biological_processGO:0030534 adult behavior IEA
 biological_processGO:0031398 positive regulation of protein ubiquitination IEA
 biological_processGO:0032436 positive regulation of proteasomal ubiquitin-dependent protein catabolic process IEA
 biological_processGO:0042415 norepinephrine metabolic process IEA
 biological_processGO:0042428 serotonin metabolic process IEA
 biological_processGO:0050790 regulation of catalytic activity IEA
 biological_processGO:1901360 organic cyclic compound metabolic process IEA
 cellular_componentGO:0005622 intracellular IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0031227 intrinsic component of endoplasmic reticulum membrane IEA
 molecular_functionGO:0031624 ubiquitin conjugating enzyme binding IEA
 molecular_functionGO:0061630 ubiquitin protein ligase activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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