ENSGALG00000016164


Gallus gallus

Features
Gene ID: ENSGALG00000016164
  
Biological name :ABCG1
  
Synonyms : ABCG1 / ATP binding cassette subfamily G member 1
  
Possible biological names infered from orthology : P45844 / Q64343
  
Species: Gallus gallus
  
Chr. number: 1
Strand: 1
Band:
Gene start: 109319985
Gene end: 109372658
  
Corresponding Affymetrix probe sets: Gga.6700.1.S1_at (Chicken Array)   Gga.6700.1.S1_s_at (Chicken Array)   GgaAffx.10317.4.S1_at (Chicken Array)   GgaAffx.10317.4.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000025999
Ensembl peptide - ENSGALP00000054607
NCBI entrez gene - 418533     See in Manteia.
RefSeq - XM_416742
swissprot - A0A1D5PP11
swissprot - E1BYW4
Ensembl - ENSGALG00000016164
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 abcg1ENSDARG00000063475Danio rerio
 ABCG1ENSG00000160179Homo sapiens
 Abcg1ENSMUSG00000024030Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ABCG4 / ATP binding cassette subfamily G member 4 / Q9H172*ENSGALG0000000679570
ABCG2 / Gallus gallus ATP binding cassette subfamily G member 2 (Junior blood group) (ABCG2), mRNA. / Abcg3* / Q99P81* / Q9UNQ0* / ATP binding cassette subfamily G member 3* / ATP binding c...ENSGALG0000003067725
ABCG5 / ATP binding cassette subfamily G member 5 / Q99PE8* / Q9H222*ENSGALG0000000995522


Protein motifs (from Interpro)
Interpro ID Name
 IPR003439  ABC transporter-like
 IPR003593  AAA+ ATPase domain
 IPR005284  Pigment precursor permease/Protein ATP-binding cassette sub-family G
 IPR013525  ABC-2 type transporter
 IPR017871  ABC transporter, conserved site
 IPR020064  ABC transporter, G1
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0008203 cholesterol metabolic process IEA
 biological_processGO:0010033 response to organic substance IEA
 biological_processGO:0010872 regulation of cholesterol esterification IEA
 biological_processGO:0010875 positive regulation of cholesterol efflux IEA
 biological_processGO:0010888 negative regulation of lipid storage IEA
 biological_processGO:0030301 cholesterol transport IEA
 biological_processGO:0032367 intracellular cholesterol transport IEA
 biological_processGO:0033344 cholesterol efflux IEA
 biological_processGO:0033700 phospholipid efflux IEA
 biological_processGO:0033993 response to lipid IEA
 biological_processGO:0034374 low-density lipoprotein particle remodeling IEA
 biological_processGO:0034375 high-density lipoprotein particle remodeling IEA
 biological_processGO:0034436 glycoprotein transport IEA
 biological_processGO:0042632 cholesterol homeostasis IEA
 biological_processGO:0042987 amyloid precursor protein catabolic process IEA
 biological_processGO:0043691 reverse cholesterol transport IEA
 biological_processGO:0045542 positive regulation of cholesterol biosynthetic process IEA
 biological_processGO:0055085 transmembrane transport IEA
 biological_processGO:0055091 phospholipid homeostasis IEA
 biological_processGO:0071403 cellular response to high density lipoprotein particle stimulus IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005768 endosome IEA
 cellular_componentGO:0005886 plasma membrane IBA
 cellular_componentGO:0009897 external side of plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0055037 recycling endosome IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0005548 phospholipid transporter activity IEA
 molecular_functionGO:0016887 ATPase activity IEA
 molecular_functionGO:0017127 cholesterol transporter activity IEA
 molecular_functionGO:0019534 toxin transmembrane transporter activity IEA
 molecular_functionGO:0034041 sterol-transporting ATPase activity IEA
 molecular_functionGO:0034437 glycoprotein transporter activity IEA
 molecular_functionGO:0042803 protein homodimerization activity IEA
 molecular_functionGO:0043531 ADP binding IEA
 molecular_functionGO:0046982 protein heterodimerization activity IEA


Pathways (from Reactome)
Pathway description
ABC transporters in lipid homeostasis
HDL remodeling


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000016164 ABCG1 / ATP binding cassette subfamily G member 1 / P45844* / Q64343*  / complex






 

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