ENSGALG00000017136


Gallus gallus

Features
Gene ID: ENSGALG00000017136
  
Biological name :GJB6
  
Synonyms : Gap junction beta-6 protein / GJB6 / O93533
  
Possible biological names infered from orthology : gap junction protein beta 2 / gap junction protein beta 6 / GJB2 / O95452 / P29033 / P70689 / Q00977
  
Species: Gallus gallus
  
Chr. number: 1
Strand: 1
Band:
Gene start: 178964001
Gene end: 178972334
  
Corresponding Affymetrix probe sets: Gga.1951.1.S1_at (Chicken Array)   Gga.1951.1.S2_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000027628
NCBI entrez gene - 395771     See in Manteia.
RefSeq - XM_015277700
RefSeq - NM_204931
RefSeq - XM_015277689
RefSeq - XM_015277694
RefSeq Peptide - NP_990262
swissprot - O93533
Ensembl - ENSGALG00000017136
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cx30.3ENSDARG00000042707Danio rerio
 GJB2ENSG00000165474Homo sapiens
 GJB6ENSG00000121742Homo sapiens
 Gjb2ENSMUSG00000046352Mus musculus
 Gjb6ENSMUSG00000040055Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
GJB2 / GJB6* / O95452* / P29033* / P70689* / Q00977* / gap junction protein beta 6* / gap junction protein beta 2*ENSGALG0000002272068
GJB1 / gap junction protein beta 1 / P08034* / P28230*ENSGALG0000000554158
GJB3 / gap junction protein beta 3 / O75712* / P28231*ENSGALG0000002842448
GJD4 / gap junction protein delta 4 / Q8BSD4* / Q96KN9*ENSGALG0000000706530


Protein motifs (from Interpro)
Interpro ID Name
 IPR000500  Connexin
 IPR013092  Connexin, N-terminal
 IPR017990  Connexin, conserved site
 IPR019570  Gap junction protein, cysteine-rich domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007154 cell communication IEA
 biological_processGO:0007605 sensory perception of sound IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005921 gap junction IEA
 cellular_componentGO:0005922 connexin complex IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030054 cell junction IEA


Pathways (from Reactome)
Pathway description
Gap junction assembly
Transport of connexons to the plasma membrane


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000017136 GJB6 / O93533 / Gap junction beta-6 protein / GJB2* / Q00977* / P29033* / P70689* / O95452* / gap junction protein beta 6* / gap junction protein beta 2*  / complex
 ENSGALG00000022720 GJB2 / GJB6* / O95452* / P29033* / P70689* / Q00977* / gap junction protein beta 6* / gap junction protein beta 2*  / complex






 

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