ENSGALG00000017170


Gallus gallus

Features
Gene ID: ENSGALG00000017170
  
Biological name :ALKBH8
  
Synonyms : ALKBH8 / alkB homolog 8, tRNA methyltransferase
  
Possible biological names infered from orthology : Alkylated DNA repair 8 / Q80Y20 / Q96BT7
  
Species: Gallus gallus
  
Chr. number: 1
Strand: 1
Band:
Gene start: 180575075
Gene end: 180634272
  
Corresponding Affymetrix probe sets: GgaAffx.11006.1.S1_at (Chicken Array)   GgaAffx.11006.3.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000047020
Ensembl peptide - ENSGALP00000027679
NCBI entrez gene - 418972     See in Manteia.
RefSeq - XM_417166
RefSeq - XM_015279579
RefSeq - XM_015279586
RefSeq - XM_004938826
RefSeq - XM_004938827
RefSeq - XM_004938828
RefSeq - XM_004938829
RefSeq - XM_004938831
swissprot - F1P0F6
swissprot - A0A1D5P2W9
Ensembl - ENSGALG00000017170
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 alkbh8ENSDARG00000060256Danio rerio
 ALKBH8ENSG00000137760Homo sapiens
 Alkbh8ENSMUSG00000025899Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TRMT9B / tRNA methyltransferase 9B (putative) / Q80WQ4* / Q9P272* / 6430573F11Rik* / Probable tRNA methyltransferase 9-like protein *ENSGALG0000004272615


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR005123  Oxoglutarate/iron-dependent dioxygenase
 IPR012677  Nucleotide-binding alpha-beta plait domain superfamily
 IPR013216  Methyltransferase type 11
 IPR027450  Alpha-ketoglutarate-dependent dioxygenase AlkB-like
 IPR029063  S-adenosyl-L-methionine-dependent methyltransferase
 IPR032863  Alkylated DNA repair protein alkB homologue 8


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002098 tRNA wobble uridine modification IEA
 biological_processGO:0006974 cellular response to DNA damage stimulus IEA
 biological_processGO:0008152 metabolic process IEA
 biological_processGO:0030488 tRNA methylation IEA
 biological_processGO:0055114 oxidation-reduction process IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005737 cytoplasm IBA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0016604 nuclear body IEA
 molecular_functionGO:0000049 tRNA binding IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0005506 iron ion binding IEA
 molecular_functionGO:0008168 methyltransferase activity IEA
 molecular_functionGO:0008198 ferrous iron binding IBA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0016300 tRNA (uracil) methyltransferase activity IEA
 molecular_functionGO:0016491 oxidoreductase activity IEA
 molecular_functionGO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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