ENSGALG00000029766


Gallus gallus

Features
Gene ID: ENSGALG00000029766
  
Biological name :ITGB5
  
Synonyms : integrin beta-5 precursor / ITGB5
  
Possible biological names infered from orthology : integrin subunit beta 5 / P18084
  
Species: Gallus gallus
  
Chr. number: 7
Strand: -1
Band:
Gene start: 28023106
Gene end: 28064027
  
Corresponding Affymetrix probe sets: Gga.9473.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000047825
NCBI entrez gene - 395142     See in Manteia.
RefSeq - NM_204483
RefSeq Peptide - NP_989814
swissprot - A0A1D5P560
Ensembl - ENSGALG00000029766
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 itgb5ENSDARG00000012942Danio rerio
 ITGB5ENSG00000082781Homo sapiens
 Itgb5ENSMUSG00000022817Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ITGB3 / P05106* / O54890* / AC068234.1* / Integrin beta-3 * / integrin subunit beta 3*ENSGALG0000000037951
ITGB6 / integrin subunit beta 6 / P18564* / Q9Z0T9* / Integrin beta-6 *ENSGALG0000001114144
ITGB1 / integrin subunit beta 1 / P05556* / P09055* / Integrin beta-1 *ENSGALG0000000714540
ITGB2 / integrin beta-2 precursor / Itgb2l* / P05107* / Q3UV74* / integrin subunit beta 2* / Integrin beta-2-like protein *ENSGALG0000000751138
ITGB4 / integrin subunit beta 4 / A2A863* / P16144* / Integrin beta-4 *ENSGALG0000000238932
ITGB8 / integrin subunit beta 8 / P26012*ENSGALG0000001087532
ITGBL1 / integrin subunit beta like 1 / O95965* / Q8VDV0* / Integrin beta-like protein 1 *ENSGALG0000001686714


Protein motifs (from Interpro)
Interpro ID Name
 IPR002035  von Willebrand factor, type A
 IPR002369  Integrin beta subunit, VWA domain
 IPR012896  Integrin beta subunit, tail
 IPR014836  Integrin beta subunit, cytoplasmic domain
 IPR015812  Integrin beta subunit
 IPR016201  PSI domain
 IPR027067  Integrin beta-5 subunit
 IPR032695  Integrin domain superfamily
 IPR033760  Integrin beta N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007160 cell-matrix adhesion IEA
 biological_processGO:0007179 transforming growth factor beta receptor signaling pathway IEA
 biological_processGO:0007229 integrin-mediated signaling pathway IEA
 biological_processGO:0035987 endodermal cell differentiation IEA
 biological_processGO:0043149 stress fiber assembly IEA
 biological_processGO:0090136 epithelial cell-cell adhesion IEA
 cellular_componentGO:0008305 integrin complex IEA
 cellular_componentGO:0009986 cell surface IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0034684 integrin alphav-beta5 complex IEA
 cellular_componentGO:0043235 receptor complex IEA


Pathways (from Reactome)
Pathway description
Cross-presentation of particulate exogenous antigens (phagosomes)
Molecules associated with elastic fibres
Integrin cell surface interactions
Syndecan interactions
ECM proteoglycans
Smooth Muscle Contraction


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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