ENSGALG00000032584


Gallus gallus

Features
Gene ID: ENSGALG00000032584
  
Biological name :ALX4
  
Synonyms : ALX4 / ALX homeobox 4
  
Possible biological names infered from orthology : Homeobox protein aristaless-like 4 / O35137 / Q9H161
  
Species: Gallus gallus
  
Chr. number: 5
Strand: -1
Band:
Gene start: 21810345
Gene end: 21834715
  
Corresponding Affymetrix probe sets: Gga.14849.1.A1_at (Chicken Array)   Gga.934.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000050037
NCBI entrez gene - 373976     See in Manteia.
RefSeq - NM_204162
RefSeq Peptide - NP_989493
swissprot - O93582
Ensembl - ENSGALG00000032584
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 alx4aENSDARG00000088332Danio rerio
 alx4bENSDARG00000074442Danio rerio
 ALX4ENSG00000052850Homo sapiens
 Alx4ENSMUSG00000040310Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ALX1 / ALX homeobox 1 / Q15699* / Q8C8B0* / ALX homeobox protein 1 *ENSGALG0000002721333
ARX / aristaless related homeobox / O35085* / Q96QS3* / Homeobox protein ARX *ENSGALG0000004260431
VSX2 / visual system homeobox 2 / P58304* / Q61412*ENSGALG0000003351721
PHOX2B / paired like homeobox 2b / O35690* / Q99453* / Paired mesoderm homeobox protein 2B *ENSGALG0000001425020
ALX3 / ALX homeobox 3 / O70137* / O95076* / Homeobox protein aristaless-like 3 *ENSGALG0000002586720
DRGX / dorsal root ganglia homeobox / A6NNA5* / Prrxl1* / Q8BYH0* / paired related homeobox protein-like 1*ENSGALG0000003082220
VSX1 / visual system homeobox 1 / Q91V10* / Q9NZR4*ENSGALG0000003757619
RAX2 / Q9PVY0 / Retinal homeobox protein Rx1 / Q96IS3* / retina and anterior neural fold homeobox 2*ENSGALG0000001343118
UNCX / UNC homeobox / A6NJT0* / O08934*ENSGALG0000003929218
ENSGALG0000004658418
ISX / intestine specific homeobox / A1A546* / Q2M1V0*ENSGALG0000001255716
RAX / retina and anterior neural fold homeobox / O35602* / Q9Y2V3* / Retinal homeobox protein Rx *ENSGALG0000003327916


Protein motifs (from Interpro)
Interpro ID Name
 IPR001356  Homeobox domain
 IPR003654  OAR domain
 IPR009057  Homeobox-like domain superfamily
 IPR017970  Homeobox, conserved site
 IPR033203  Homeobox protein aristaless-like 4


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001942 hair follicle development IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0007389 pattern specification process IEA
 biological_processGO:0007517 muscle organ development IEA
 biological_processGO:0009791 post-embryonic development IEA
 biological_processGO:0009952 anterior/posterior pattern specification IEA
 biological_processGO:0035108 limb morphogenesis IEA
 biological_processGO:0035115 embryonic forelimb morphogenesis IEA
 biological_processGO:0035116 embryonic hindlimb morphogenesis IEA
 biological_processGO:0042733 embryonic digit morphogenesis IEA
 biological_processGO:0042981 regulation of apoptotic process IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:0048565 digestive tract development IEA
 biological_processGO:0048704 embryonic skeletal system morphogenesis IEA
 biological_processGO:0048705 skeletal system morphogenesis IEA
 biological_processGO:0060021 roof of mouth development IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005667 transcription factor complex IEA
 molecular_functionGO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding IEA
 molecular_functionGO:0001228 transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA
 molecular_functionGO:0046982 protein heterodimerization activity IEA
 molecular_functionGO:0071837 HMG box domain binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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