ENSGALG00000034189


Gallus gallus

Features
Gene ID: ENSGALG00000034189
  
Biological name :
  
Synonyms :
  
Possible biological names infered from orthology : ladybird homeobox 1 / LBX1 / P52954 / P52955 / Transcription factor LBX1
  
Species: Gallus gallus
  
Chr. number: 6
Strand: 1
Band:
Gene start: 23016658
Gene end: 23017651
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSGALP00000054288
Ensembl peptide - ENSGALP00000054542
swissprot - A0A1D5PN49
swissprot - A0A1D5PNU8
Ensembl - ENSGALG00000034189
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 lbx1aENSDARG00000018321Danio rerio
 lbx1bENSDARG00000018611Danio rerio
 LBX1ENSG00000138136Homo sapiens
 Lbx1ENSMUSG00000025216Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TLX1 / T-cell leukemia homeobox protein 1 / P31314* / T cell leukemia homeobox 1*ENSGALG0000000783125
BARHL2 / BarH like homeobox 2 / Q8VIB5* / Q9NY43* / BarH-like 2 homeobox protein *ENSGALG0000004006925
ENSGALG0000000219124
HHEX / hematopoietically-expressed homeobox protein HHEX / P43120* / Q03014* / hematopoietically expressed homeobox*ENSGALG0000003000824
BARX1 / Q9DED6 / Homeobox protein BarH-like 1b / Q9ER42* / Q9HBU1* / BARX homeobox 1* / Homeobox protein BarH-like 1 *ENSGALG0000003555724
BARHL1 / BarH like homeobox 1 / P63157* / Q9BZE3* / BarH-like 1 homeobox protein *ENSGALG0000004321724
BARX2 / BARX homeobox 2 / O08686* / Q9UMQ3* / Homeobox protein BarH-like 2 *ENSGALG0000002938222
HLX / H2.0 like homeobox / Q14774* / Q61670* / H2.0-like homeobox protein *ENSGALG0000003725722
DBX1 / developing brain homeobox 1 / A6NMT0* / P52950* / Homeobox protein DBX1 *ENSGALG0000000396520
BSX / Q6RFL5 / Brain-specific homeobox protein homolog / Q3C1V8* / Q810B3* / brain specific homeobox*ENSGALG0000000651520
NKX6-1 / NK6 homeobox 1 / P78426* / Q99MA9* / Homeobox protein Nkx-6.1 *ENSGALG0000003254519
NKX6-2 / NK6 homeobox 2 / Q9C056*ENSGALG0000001050018
DBX2 / developing brain homeobox 2 / Q6ZNG2*ENSGALG0000000960416
NKX6-3 / NK6 homeobox 3 / A6NJ46* / Q3UHX8* / Homeobox protein Nkx-6.3 *ENSGALG0000001850316


Protein motifs (from Interpro)
Interpro ID Name
 IPR000047  Helix-turn-helix motif
 IPR001356  Homeobox domain
 IPR009057  Homeobox-like domain superfamily
 IPR017970  Homeobox, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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