ENSGALG00000018503


Gallus gallus

Features
Gene ID: ENSGALG00000018503
  
Biological name :NKX6-3
  
Synonyms : NK6 homeobox 3 / NKX6-3
  
Possible biological names infered from orthology : A6NJ46 / Homeobox protein Nkx-6.3 / Q3UHX8
  
Species: Gallus gallus
  
Chr. number: 22
Strand: -1
Band:
Gene start: 2639464
Gene end: 2641010
  
Corresponding Affymetrix probe sets: GgaAffx.2195.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000017079
NCBI entrez gene - 431254     See in Manteia.
RefSeq - XM_004947610
RefSeq - XM_428808
swissprot - E1C0H3
Ensembl - ENSGALG00000018503
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 nkx6.3ENSDARG00000060529Danio rerio
 A6NJ46ENSG00000165066Homo sapiens
 Nkx6-3ENSMUSG00000063672Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
NKX6-2 / NK6 homeobox 2 / Q9C056*ENSGALG0000001050050
NKX6-1 / NK6 homeobox 1 / P78426* / Q99MA9* / Homeobox protein Nkx-6.1 *ENSGALG0000003254544
HLX / H2.0 like homeobox / Q14774* / Q61670* / H2.0-like homeobox protein *ENSGALG0000003725722
BARHL1 / BarH like homeobox 1 / P63157* / Q9BZE3* / BarH-like 1 homeobox protein *ENSGALG0000004321721
ENSGALG0000000219120
DBX2 / developing brain homeobox 2 / Q6ZNG2*ENSGALG0000000960420
BARHL2 / BarH like homeobox 2 / Q8VIB5* / Q9NY43* / BarH-like 2 homeobox protein *ENSGALG0000004006920
TLX1 / T-cell leukemia homeobox protein 1 / P31314* / T cell leukemia homeobox 1*ENSGALG0000000783119
BARX2 / BARX homeobox 2 / O08686* / Q9UMQ3* / Homeobox protein BarH-like 2 *ENSGALG0000002938219
DBX1 / developing brain homeobox 1 / A6NMT0* / P52950* / Homeobox protein DBX1 *ENSGALG0000000396518
HHEX / hematopoietically-expressed homeobox protein HHEX / P43120* / Q03014* / hematopoietically expressed homeobox*ENSGALG0000003000818
BARX1 / Q9DED6 / Homeobox protein BarH-like 1b / Q9ER42* / Q9HBU1* / BARX homeobox 1* / Homeobox protein BarH-like 1 *ENSGALG0000003555717
BSX / Q6RFL5 / Brain-specific homeobox protein homolog / Q3C1V8* / Q810B3* / brain specific homeobox*ENSGALG0000000651515
LBX1* / P52954* / P52955* / ladybird homeobox 1* / Transcription factor LBX1 *ENSGALG0000003418915


Protein motifs (from Interpro)
Interpro ID Name
 IPR000047  Helix-turn-helix motif
 IPR001356  Homeobox domain
 IPR009057  Homeobox-like domain superfamily
 IPR017970  Homeobox, conserved site
 IPR020479  Homeobox domain, metazoa


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001709 cell fate determination IEA
 biological_processGO:0002067 glandular epithelial cell differentiation IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0030857 negative regulation of epithelial cell differentiation IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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