ENSGALG00000034319


Gallus gallus

Features
Gene ID: ENSGALG00000034319
  
Biological name :
  
Synonyms :
  
Possible biological names infered from orthology : AL645941.2 / H2-DMb1 / H2-DMb2 / histocompatibility 2, class II, locus Mb1 / histocompatibility 2, class II, locus Mb2 / HLA-DMB / major histocompatibility complex, class II, DM beta / P28068
  
Species: Gallus gallus
  
Chr. number: 16
Strand: -1
Band:
Gene start: 584101
Gene end: 584786
  
Corresponding Affymetrix probe sets: Gga.5028.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000055640
swissprot - A0A1D5PRW1
Ensembl - ENSGALG00000034319
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CU929676.1ENSDARG00000104635Danio rerio
 FO744840.1ENSDARG00000110501Danio rerio
 mhc2bENSDARG00000104730Danio rerio
 mhc2dabENSDARG00000079105Danio rerio
 mhc2dbbENSDARG00000056330Danio rerio
 si:busm1-104n07.3ENSDARG00000074510Danio rerio
 si:busm1-228j01.4ENSDARG00000088872Danio rerio
 si:busm1-228j01.6ENSDARG00000041705Danio rerio
 si:ch73-158p21.3ENSDARG00000101030Danio rerio
 si:zfos-2070c2.3ENSDARG00000076307Danio rerio
 zgc:103700ENSDARG00000116524Danio rerio
 AL645941.2ENSG00000248993Homo sapiens
 P28068ENSG00000242574Homo sapiens
 H2-DMb1ENSMUSG00000079547Mus musculus
 H2-DMb2ENSMUSG00000037548Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
P28068* / HLA-DMB* / H2-DMb1* / H2-DMb2* / AL645941.2* / histocompatibility 2, class II, locus Mb2* / histocompatibility 2, class II, locus Mb1* / major histocompatibility complex, class II, DM beta*ENSGALG0000004450295
BLB2 / Gallus gallus Major histocompatibility complex class II beta chain BLB2, (similar to HLA class II, D beta chain) (BLB2), mRNA. / P28068* / H2-DMb2* / H2-DMb1* / HLA-DMB* / AL645941.2...ENSGALG0000003094073
BLB1 / P28068* / HLA-DMB* / H2-DMb1* / H2-DMb2* / AL645941.2* / histocompatibility 2, class II, locus Mb2* / histocompatibility 2, class II, locus Mb1* / major histocompatibility complex, c...ENSGALG0000000014162
DMB2ENSGALG0000003839331
DMB1ENSGALG0000000016230


Protein motifs (from Interpro)
Interpro ID Name
 IPR003006  Immunoglobulin/major histocompatibility complex, conserved site
 IPR003597  Immunoglobulin C1-set
 IPR007110  Immunoglobulin-like domain
 IPR013783  Immunoglobulin-like fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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