ENSGALG00000037522


Gallus gallus

Features
Gene ID: ENSGALG00000037522
  
Biological name :SBNO2
  
Synonyms : SBNO2 / strawberry notch homolog 2
  
Possible biological names infered from orthology : Protein strawberry notch homolog 2 / Q7TNB8 / Q9Y2G9
  
Species: Gallus gallus
  
Chr. number: 28
Strand: -1
Band:
Gene start: 2964719
Gene end: 3005729
  
Corresponding Affymetrix probe sets: GgaAffx.25575.1.S1_at (Chicken Array)   GgaAffx.25575.1.S1_s_at (Chicken Array)   GgaAffx.25575.5.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000045279
Ensembl peptide - ENSGALP00000055551
NCBI entrez gene - 420104     See in Manteia.
RefSeq - XM_003642861
RefSeq - XM_004948874
RefSeq - XM_015299979
RefSeq - XM_015299980
swissprot - A0A1D5PRM4
swissprot - A0A1D5NY24
Ensembl - ENSGALG00000037522
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sbno2aENSDARG00000098801Danio rerio
 si:ch73-63e15.2ENSDARG00000016188Danio rerio
 SBNO2ENSG00000064932Homo sapiens
 Sbno2ENSMUSG00000035673Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SBNO1 / Q5F371 / Protein strawberry notch homolog 1 / A3KN83* / strawberry notch 1* / strawberry notch homolog 1*ENSGALG0000000339240


Protein motifs (from Interpro)
Interpro ID Name
 IPR026741  Protein strawberry notch
 IPR026937  Strawberry notch, helicase C domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR030410  Protein strawberry notch homologue 2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002281 macrophage activation involved in immune response IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0030282 bone mineralization IEA
 biological_processGO:0030316 osteoclast differentiation IEA
 biological_processGO:0045892 negative regulation of transcription, DNA-templated IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:0050727 regulation of inflammatory response IEA
 biological_processGO:0061430 bone trabecula morphogenesis IEA
 biological_processGO:0071222 cellular response to lipopolysaccharide IEA
 biological_processGO:0071348 cellular response to interleukin-11 IEA
 biological_processGO:0071354 cellular response to interleukin-6 IEA
 biological_processGO:0072674 multinuclear osteoclast differentiation IEA
 biological_processGO:0072675 osteoclast fusion IEA
 biological_processGO:1990830 cellular response to leukemia inhibitory factor IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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