ENSDARG00000016188


Danio rerio
strawberrynotchsi:ch73-63e15.2proteinregulationhelicasecdomainp-loopcontainingnucleosidetriphosphatehydrolasehomologuetranscriptiondna-templatedinflammatoryresponse

Features
Gene ID: ENSDARG00000016188
  
Biological name :si:ch73-63e15.2
  
Synonyms : si:ch73-63e15.2
  
Possible biological names infered from orthology : Protein strawberry notch homolog 2 / Q7TNB8 / Q9Y2G9 / SBNO2 / strawberry notch homolog 2
  
Species: Danio rerio
  
Chr. number: 22
Strand: -1
Band:
Gene start: 17691381
Gene end: 17781213
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000145174
Ensembl peptide - ENSDARP00000121656
NCBI entrez gene - 100002292     See in Manteia.
RefSeq - XM_001342080
RefSeq - XM_009296338
swissprot - E7F5T6
ZFIN ID - ZDB-GENE-091204-463
Ensembl - ENSDARG00000016188
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SBNO2ENSGALG00000037522Gallus gallus
 SBNO2ENSG00000064932Homo sapiens
 Sbno2ENSMUSG00000035673Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
sbno2a / strawberry notch homolog 2a / SBNO2* / Q9Y2G9* / strawberry notch homolog 2*ENSDARG0000009880158
sbno1 / strawberry notch homolog 1 (Drosophila) / A3KN83* / strawberry notch 1* / strawberry notch homolog 1*ENSDARG0000009908041


Protein motifs (from Interpro)
Interpro ID Name
 IPR026741  Protein strawberry notch
 IPR026937  Strawberry notch, helicase C domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR030410  Protein strawberry notch homologue 2


Gene Ontology (GO)
nitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processresponse to stressresponse to external stimulusnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processresponse to stressresponse to external stimulusnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processresponse to stressresponse to external stimulusnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processresponse to stressresponse to external stimulusnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processresponse to stressresponse to external stimulusnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processresponse to stressresponse to external stimulusnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processresponse to stressresponse to external stimulusnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processresponse to stressresponse to external stimulusnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processresponse to stressresponse to external stimulusnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processresponse to stressresponse to external stimulusnitrogen compound menitrogen compound metabolic processbiosynthetic processbiosynthetic processcellular metabolic pcellular metabolic processprimary metabolic prprimary metabolic processorganic substance meorganic substance metabolic processresponse to stressresponse to stressresponse to externalresponse to external stimulus
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0050727 regulation of inflammatory response IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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