ENSGALG00000038504


Gallus gallus

Features
Gene ID: ENSGALG00000038504
  
Biological name :MID1
  
Synonyms : E3 ubiquitin-protein ligase Midline-1 / MID1
  
Possible biological names infered from orthology : midline 1 / O15344 / O70583
  
Species: Gallus gallus
  
Chr. number: 1
Strand: 1
Band:
Gene start: 124632218
Gene end: 124725073
  
Corresponding Affymetrix probe sets: Gga.159.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000051777
NCBI entrez gene - 373920     See in Manteia.
RefSeq - NM_204129
RefSeq Peptide - NP_989460
swissprot - A0A1D5PG57
Ensembl - ENSGALG00000038504
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 mid1ENSDARG00000060482Danio rerio
 MID1ENSG00000101871Homo sapiens
 Mid1ENSMUSG00000035299Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
MID2 / midline 2 / Q9UJV3* / Mus musculus midline 2 (Mid2), transcript variant 2, mRNA.*ENSGALG0000000386075
TRIM36 / tripartite motif containing 36 / Q80WG7* / Q9NQ86* / E3 ubiquitin-protein ligase Trim36 *ENSGALG0000000818827
TRIM9 / tripartite motif containing 9 / Q8C7M3* / Q9C026* / E3 ubiquitin-protein ligase TRIM9 *ENSGALG0000001236727
FSD1L / fibronectin type III and SPRY domain containing 1 like / Q8BYN5* / Q9BXM9* / Mus musculus fibronectin type III and SPRY domain containing 1-like (Fsd1l), transcript variant 3, mRNA.*ENSGALG0000001544221
TRIM67 / tripartite motif containing 67 / Q505D9* / Q6ZTA4* / Tripartite motif-containing protein 67 *ENSGALG0000003096017
TRIM55 / tripartite motif-containing protein 55 / Q9BYV6* / tripartite motif containing 55*ENSGALG0000004132716
TRIM63 / tripartite motif containing 63 / Q969Q1*ENSGALG0000003410715
TRIM54 / tripartite motif containing 54 / Q9BYV2* / Q9ERP3* / Tripartite motif-containing protein 54 *ENSGALG0000003320314
FSD1* / Q7TPM6* / Q9BTV5* / fibronectin type III and SPRY domain containing 1* / Fibronectin type III and SPRY domain-containing protein 1 *ENSGALG000000329385


Protein motifs (from Interpro)
Interpro ID Name
 IPR000315  B-box-type zinc finger
 IPR001841  Zinc finger, RING-type
 IPR001870  B30.2/SPRY domain
 IPR003649  B-box, C-terminal
 IPR003877  SPRY domain
 IPR003879  Butyrophylin-like, SPRY domain
 IPR003961  Fibronectin type III
 IPR006574  SPRY-associated
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR013783  Immunoglobulin-like fold
 IPR017903  COS domain
 IPR017907  Zinc finger, RING-type, conserved site
 IPR027370  RING-type zinc-finger, LisH dimerisation motif
 IPR027727  Midline-1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007026 negative regulation of microtubule depolymerization IEA
 biological_processGO:0032874 positive regulation of stress-activated MAPK cascade IEA
 biological_processGO:0035372 protein localization to microtubule IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005874 microtubule IEA
 cellular_componentGO:0005881 cytoplasmic microtubule IEA
 cellular_componentGO:0015630 microtubule cytoskeleton IEA
 molecular_functionGO:0008017 microtubule binding IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0031625 ubiquitin protein ligase binding IEA
 molecular_functionGO:0042802 identical protein binding IEA
 molecular_functionGO:0042803 protein homodimerization activity IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0046982 protein heterodimerization activity IEA
 molecular_functionGO:0051219 phosphoprotein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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