ENSGALG00000040006


Gallus gallus

Features
Gene ID: ENSGALG00000040006
  
Biological name :TBL1X
  
Synonyms : TBL1X
  
Possible biological names infered from orthology : F-box-like/WD repeat-containing protein TBL1X / O60907 / Q9BQ87 / Q9QXE7 / TBL1Y / transducin beta like 1 X-linked / transducin beta like 1 Y-linked
  
Species: Gallus gallus
  
Chr. number: 1
Strand: -1
Band:
Gene start: 125174591
Gene end: 125314711
  
Corresponding Affymetrix probe sets: Gga.19324.1.S1_at (Chicken Array)   Gga.5909.1.S1_at (Chicken Array)   Gga.9328.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000052446
Ensembl peptide - ENSGALP00000057664
NCBI entrez gene - 426045     See in Manteia.
RefSeq - XM_015273697
RefSeq - XM_015273683
RefSeq - XM_015273688
RefSeq - XM_015273692
RefSeq - NM_001159754
RefSeq Peptide - NP_001153226
swissprot - A0A1D5PXG9
swissprot - A0A1D5PI14
Ensembl - ENSGALG00000040006
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tbl1xENSDARG00000060438Danio rerio
 TBL1XENSG00000101849Homo sapiens
 TBL1YENSG00000092377Homo sapiens
 Tbl1xENSMUSG00000025246Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TBL1XR1 / F-box-like/WD repeat-containing protein TBL1XR1 / Q8BHJ5* / Q9BZK7* / transducin beta like 1 X-linked receptor 1*ENSGALG0000003918288
THOC3 / Q8VE80* / Q96J01* / THO complex 3* / THO complex subunit 3 *ENSGALG0000002417214


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR006594  LIS1 homology motif
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR019775  WD40 repeat, conserved site
 IPR020472  G-protein beta WD-40 repeat


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEA
 biological_processGO:0043627 response to estrogen IEA
 biological_processGO:0045444 fat cell differentiation IEA
 biological_processGO:0045892 negative regulation of transcription, DNA-templated IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:0048545 response to steroid hormone IEA
 cellular_componentGO:0005667 transcription factor complex IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003682 chromatin binding IEA
 molecular_functionGO:0003714 transcription corepressor activity IEA
 molecular_functionGO:0044212 transcription regulatory region DNA binding IEA


Pathways (from Reactome)
Pathway description
Regulation of lipid metabolism by Peroxisome proliferator-activated receptor alpha (PPARalpha)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000015937 FABP1 / fatty acid binding protein 1 / P07148* / P12710* / Fatty acid-binding protein, liver *  / reaction
 ENSGALG00000041470 PPARA / peroxisome proliferator-activated receptor alpha / P23204* / Q07869*  / complex / reaction
 ENSGALG00000039182 TBL1XR1 / F-box-like/WD repeat-containing protein TBL1XR1 / Q8BHJ5* / Q9BZK7* / transducin beta like 1 X-linked receptor 1*  / complex / reaction






 

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