ENSGALG00000040521


Gallus gallus

Features
Gene ID: ENSGALG00000040521
  
Biological name :HOXA2
  
Synonyms : Homeobox protein Hox-A2 / HOXA2 / Q08727
  
Possible biological names infered from orthology : homeobox A2 / O43364 / P31245
  
Species: Gallus gallus
  
Chr. number: 2
Strand: -1
Band:
Gene start: 32640373
Gene end: 32642224
  
Corresponding Affymetrix probe sets: Gga.621.1.S1_at (Chicken Array)   GgaAffx.6998.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000044883
Ensembl peptide - ENSGALP00000062844
NCBI entrez gene - 396055     See in Manteia.
RefSeq - NM_205150
RefSeq Peptide - NP_990481
swissprot - A0A1L1RVI2
swissprot - A0A1D5NWZ0
swissprot - Q08727
Ensembl - ENSGALG00000040521
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 hoxa2bENSDARG00000023031Danio rerio
 hoxb2aENSDARG00000000175Danio rerio
 HOXA2ENSG00000105996Homo sapiens
 Hoxa2ENSMUSG00000014704Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
HOXB2 / homeobox B2 / P0C1T1* / P14652* / Homeobox protein Hox-B2 *ENSGALG0000002577431
HOXA3 / homeobox A3 / O43365* / P02831* / Homeobox protein Hox-A3 *ENSGALG0000002792525
HOXB3 / P09026* / P14651* / homeobox B3* / Homeobox protein Hox-B3 *ENSGALG0000004321925
HOXD3 / homeobox D3 / P09027* / P31249*ENSGALG0000002342023
PDX1 / pancreatic and duodenal homeobox 1 / P52945* / P52946* / Pancreas/duodenum homeobox protein 1 *ENSGALG0000003845419
HOXB1ENSGALG0000001345418
HOXA1 / homeobox A1 / P49639*ENSGALG0000002809517
GSX2* / P31316* / Q9BZM3* / GS homeobox 2*ENSGALG0000003594317
GSX1 / GS homeobox 1 / P31315* / Q9H4S2*ENSGALG0000002977915


Protein motifs (from Interpro)
Interpro ID Name
 IPR001356  Homeobox domain
 IPR001827  Homeobox protein, antennapedia type, conserved site
 IPR009057  Homeobox-like domain superfamily
 IPR017970  Homeobox, conserved site
 IPR020479  Homeobox domain, metazoa


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IEA
 biological_processGO:0001709 cell fate determination IEA
 biological_processGO:0002076 osteoblast development IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0007379 segment specification IEA
 biological_processGO:0007389 pattern specification process IEA
 biological_processGO:0008045 motor neuron axon guidance IEA
 biological_processGO:0009952 anterior/posterior pattern specification IEA
 biological_processGO:0009953 dorsal/ventral pattern formation IEA
 biological_processGO:0021568 rhombomere 2 development IEA
 biological_processGO:0021569 rhombomere 3 development IEA
 biological_processGO:0021658 rhombomere 3 morphogenesis IEA
 biological_processGO:0035284 brain segmentation IEA
 biological_processGO:0042474 middle ear morphogenesis IEA
 biological_processGO:0045165 cell fate commitment IEA
 biological_processGO:0045665 negative regulation of neuron differentiation IEA
 biological_processGO:0045668 negative regulation of osteoblast differentiation IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:0048703 embryonic viscerocranium morphogenesis IEA
 biological_processGO:0048704 embryonic skeletal system morphogenesis IEA
 biological_processGO:0071300 cellular response to retinoic acid IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IEA
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0001078 transcriptional repressor activity, RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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