ENSGALG00000043219


Gallus gallus

Features
Gene ID: ENSGALG00000043219
  
Biological name :HOXB3
  
Synonyms : HOXB3
  
Possible biological names infered from orthology : homeobox B3 / Homeobox protein Hox-B3 / P09026 / P14651
  
Species: Gallus gallus
  
Chr. number: 27
Strand: 1
Band:
Gene start: 3861027
Gene end: 3863525
  
Corresponding Affymetrix probe sets: Gga.2648.1.S1_at (Chicken Array)   Gga.2648.1.S2_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000050233
NCBI entrez gene - 395502     See in Manteia.
RefSeq - XM_015299432
RefSeq - NM_204743
RefSeq - XM_015299430
RefSeq - XM_015299431
RefSeq - XM_015299426
RefSeq - XM_015299427
RefSeq - XM_015299428
RefSeq - XM_015299429
RefSeq Peptide - NP_990074
swissprot - A0A1D5PBV1
Ensembl - ENSGALG00000043219
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 hoxb3aENSDARG00000029263Danio rerio
 HOXB3ENSG00000120093Homo sapiens
 Hoxb3ENSMUSG00000048763Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
HOXA3 / homeobox A3 / O43365* / P02831* / Homeobox protein Hox-A3 *ENSGALG0000002792559
HOXD3 / homeobox D3 / P09027* / P31249*ENSGALG0000002342055
HOXA2 / Q08727 / Homeobox protein Hox-A2 / O43364* / P31245* / homeobox A2*ENSGALG0000004052123
HOXB2 / homeobox B2 / P0C1T1* / P14652* / Homeobox protein Hox-B2 *ENSGALG0000002577419
HOXA1 / homeobox A1 / P49639*ENSGALG0000002809518
PDX1 / pancreatic and duodenal homeobox 1 / P52945* / P52946* / Pancreas/duodenum homeobox protein 1 *ENSGALG0000003845418
HOXB1ENSGALG0000001345417
GSX1 / GS homeobox 1 / P31315* / Q9H4S2*ENSGALG0000002977916
GSX2* / P31316* / Q9BZM3* / GS homeobox 2*ENSGALG0000003594315


Protein motifs (from Interpro)
Interpro ID Name
 IPR001356  Homeobox domain
 IPR001827  Homeobox protein, antennapedia type, conserved site
 IPR009057  Homeobox-like domain superfamily
 IPR017970  Homeobox, conserved site
 IPR020479  Homeobox domain, metazoa
 IPR025281  Domain of unknown function DUF4074


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0007275 multicellular organism development IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr