ENSGALG00000040751


Gallus gallus

Features
Gene ID: ENSGALG00000040751
  
Biological name :
  
Synonyms :
  
Possible biological names infered from orthology : Pcdhac1 / protocadherin alpha subfamily C, 1
  
Species: Gallus gallus
  
Chr. number: 13
Strand: 1
Band:
Gene start: 1773042
Gene end: 1775759
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSGALP00000055326
NCBI entrez gene - 100858040     See in Manteia.
RefSeq - XM_015293565
swissprot - A0A1D5PR05
Ensembl - ENSGALG00000040751
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 BX005294.2ENSDARG00000109361Danio rerio
 pcdh1g3ENSDARG00000099646Danio rerio
 Pcdhac1ENSMUSG00000103255Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q9Y5I4* / Pcdhac1* / PCDHAC2* / protocadherin alpha subfamily C, 1* / protocadherin alpha subfamily C, 2*ENSGALG0000003869313


Protein motifs (from Interpro)
Interpro ID Name
 IPR002126  Cadherin
 IPR013164  Cadherin, N-terminal
 IPR015919  Cadherin-like
 IPR020894  Cadherin conserved site
 IPR032455  Cadherin, cytoplasmic C-terminal domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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