ENSDARG00000109361


Danio rerio

Features
Gene ID: ENSDARG00000109361
  
Biological name :BX005294.2
  
Synonyms : BX005294.2
  
Possible biological names infered from orthology : Pcdhac1 / protocadherin alpha subfamily C, 1
  
Species: Danio rerio
  
Chr. number: 14
Strand: -1
Band:
Gene start: 2035749
Gene end: 2036604
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000148699
Ensembl - ENSDARG00000109361
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000040751Gallus gallus
 Pcdhac1ENSMUSG00000103255Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
pcdh1g3 / protocadherin 1 gamma 3 / Pcdhac1* / protocadherin alpha subfamily C, 1*ENSDARG0000009964652
pcdh2ac / protocadherin 2 alpha c / Q9Y5I4* / PCDHAC2* / Pcdhac1* / protocadherin alpha subfamily C, 1* / protocadherin alpha subfamily C, 2*ENSDARG0000009978341
pcdh2ac / pcdh2ab9 / protocadherin 2 alpha b 9 / Q9Y5I4* / PCDHAC2* / Pcdhac1* / protocadherin alpha subfamily C, 1* / protocadherin alpha subfamily C, 2*ENSDARG0000010131841
pcdh2ab10 / protocadherin 2 alpha b 10 / Pcdhac1* / protocadherin alpha subfamily C, 1*ENSDARG0000010390640
pcdh1g32 / protocadherin 1 gamma 32 / Pcdhac1* / protocadherin alpha subfamily C, 1*ENSDARG0000010082937


Protein motifs (from Interpro)
Interpro ID Name
 IPR002126  Cadherin
 IPR013164  Cadherin, N-terminal
 IPR015919  Cadherin-like
 IPR020894  Cadherin conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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