ENSDARG00000101318


Danio rerio

Features
Gene ID: ENSDARG00000101318
  
Biological name :pcdh2ab9
  
Synonyms : pcdh2ab9 / pcdh2ac / protocadherin 2 alpha b 9
  
Possible biological names infered from orthology : Pcdhac1 / PCDHAC2 / protocadherin alpha subfamily C, 1 / protocadherin alpha subfamily C, 2 / Q9Y5I4
  
Species: Danio rerio
  
Chr. number: 14
Strand: -1
Band:
Gene start: 2118775
Gene end: 2285955
  
Corresponding Affymetrix probe sets: Dr.1782.1.A1_at (Zebrafish Array)   Dr.19866.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000157232
Ensembl peptide - ENSDARP00000109486
Ensembl peptide - ENSDARP00000130311
Ensembl peptide - ENSDARP00000144849
Ensembl peptide - ENSDARP00000154289
Ensembl peptide - ENSDARP00000157168
swissprot - A0A0R4I9U6
swissprot - F1QHH7
ZFIN ID - ZDB-GENE-041118-12
ZFIN ID - ZDB-GENE-041118-8
Ensembl - ENSDARG00000101318
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q9Y5I4ENSG00000243232Homo sapiens
 Pcdhac1ENSMUSG00000103255Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
pcdh2ac / protocadherin 2 alpha c / Q9Y5I4* / PCDHAC2* / Pcdhac1* / protocadherin alpha subfamily C, 1* / protocadherin alpha subfamily C, 2*ENSDARG0000009978398
pcdh2ab10 / protocadherin 2 alpha b 10 / Pcdhac1* / protocadherin alpha subfamily C, 1*ENSDARG0000010390645
pcdh1g3 / protocadherin 1 gamma 3 / Pcdhac1* / protocadherin alpha subfamily C, 1*ENSDARG0000009964632
pcdh1g32 / protocadherin 1 gamma 32 / Pcdhac1* / protocadherin alpha subfamily C, 1*ENSDARG0000010082932
BX005294.2ENSDARG0000010936110


Protein motifs (from Interpro)
Interpro ID Name
 IPR002126  Cadherin
 IPR013164  Cadherin, N-terminal
 IPR015919  Cadherin-like
 IPR020894  Cadherin conserved site
 IPR031904  Cadherin, C-terminal catenin-binding domain
 IPR032455  Cadherin, cytoplasmic C-terminal domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules IEA
 biological_processGO:0007267 cell-cell signaling IBA
 biological_processGO:0007399 nervous system development IBA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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