ENSGALG00000042853


Gallus gallus

Features
Gene ID: ENSGALG00000042853
  
Biological name :GGPS1
  
Synonyms : geranylgeranyl diphosphate synthase 1 / GGPS1
  
Possible biological names infered from orthology : Geranylgeranyl pyrophosphate synthase / O95749 / Q9WTN0
  
Species: Gallus gallus
  
Chr. number: 3
Strand: -1
Band:
Gene start: 38224970
Gene end: 38241776
  
Corresponding Affymetrix probe sets: GgaAffx.1708.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000043758
Ensembl peptide - ENSGALP00000044866
NCBI entrez gene - 427092     See in Manteia.
RefSeq - XM_424685
RefSeq - XM_015284409
swissprot - A0A1D5NWX3
swissprot - A0A1D5NTV1
Ensembl - ENSGALG00000042853
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ggps1ENSDARG00000023627Danio rerio
 GGPS1ENSG00000152904Homo sapiens
 Ggps1ENSMUSG00000021302Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000092  Polyprenyl synthetase
 IPR008949  Isoprenoid synthase domain superfamily
 IPR033749  Polyprenyl synthetase, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006720 isoprenoid metabolic process IEA
 biological_processGO:0008299 isoprenoid biosynthetic process IEA
 molecular_functionGO:0004311 farnesyltranstransferase activity IEA
 molecular_functionGO:0004337 geranyltranstransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0042802 identical protein binding IEA


Pathways (from Reactome)
Pathway description
Cholesterol biosynthesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000042853 GGPS1 / geranylgeranyl diphosphate synthase 1 / O95749* / Q9WTN0* / Geranylgeranyl pyrophosphate synthase *  / complex






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr