ENSGALG00000043016


Gallus gallus

Features
Gene ID: ENSGALG00000043016
  
Biological name :CD6
  
Synonyms : CD6 / CD6 molecule
  
Possible biological names infered from orthology : P30203 / Q61003 / T-cell differentiation antigen CD6
  
Species: Gallus gallus
  
Chr. number: 5
Strand: 1
Band:
Gene start: 22001
Gene end: 24367
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSGALP00000056817
NCBI entrez gene - 101748655     See in Manteia.
RefSeq - XM_015286126
RefSeq - XM_015286127
swissprot - A0A1D5PV57
Ensembl - ENSGALG00000043016
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 si:dkey-242e21.3ENSDARG00000075723Danio rerio
 CD6ENSG00000013725Homo sapiens
 Cd6ENSMUSG00000024670Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
LOXL2ENSGALG0000000040216
LOXL4 / lysyl oxidase like 4 / Q924C6* / Q96JB6* / Lysyl oxidase homolog 4 *ENSGALG0000001309015
LOX / protein-lysine 6-oxidase precursor / P28300* / P28301* / lysyl oxidase* / Protein-lysine 6-oxidase *ENSGALG000000280637
ENSGALG000000282476
LOXL2* / P58022* / Q9Y4K0* / lysyl oxidase like 2* / Lysyl oxidase homolog 2 *ENSGALG000000384585
MARCO / macrophage receptor MARCO / Q60754* / Q9UEW3* / macrophage receptor with collagenous structure*ENSGALG000000121194
SCARA5 / scavenger receptor class A member 5 / Q6ZMJ2* / Q8K299*ENSGALG000000165804


Protein motifs (from Interpro)
Interpro ID Name
 IPR001190  SRCR domain
 IPR017448  SRCR-like domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001771 immunological synapse formation IEA
 biological_processGO:0002438 acute inflammatory response to antigenic stimulus IEA
 biological_processGO:0006898 receptor-mediated endocytosis IEA
 biological_processGO:0007157 heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules IEA
 biological_processGO:0031663 lipopolysaccharide-mediated signaling pathway IEA
 biological_processGO:0032496 response to lipopolysaccharide IEA
 biological_processGO:0042102 positive regulation of T cell proliferation IEA
 biological_processGO:1900017 positive regulation of cytokine production involved in inflammatory response IEA
 cellular_componentGO:0001772 immunological synapse IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0031226 intrinsic component of plasma membrane IEA
 cellular_componentGO:0042101 T cell receptor complex IEA
 molecular_functionGO:0001530 lipopolysaccharide binding IEA
 molecular_functionGO:0005044 scavenger receptor activity IEA
 molecular_functionGO:0042802 identical protein binding IEA
 molecular_functionGO:0070891 lipoteichoic acid binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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