ENSDARG00000075723


Danio rerio

Features
Gene ID: ENSDARG00000075723
  
Biological name :si:dkey-242e21.3
  
Synonyms : si:dkey-242e21.3
  
Possible biological names infered from orthology : CD6 / CD6 molecule / P30203 / Q61003 / T-cell differentiation antigen CD6
  
Species: Danio rerio
  
Chr. number: 16
Strand: -1
Band:
Gene start: 40353816
Gene end: 40373836
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000119459
swissprot - F1R2Y3
ZFIN ID - ZDB-GENE-100922-110
Ensembl - ENSDARG00000075723
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CD6ENSGALG00000043016Gallus gallus
 CD6ENSG00000013725Homo sapiens
 Cd6ENSMUSG00000024670Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
B8A4W9 / loxl3b / lysyl oxidase-like 3bENSDARG0000003956317
F1RD85 / loxl3a / lysyl oxidase-like 3aENSDARG0000007630617
loxl4 / lysyl oxidase-like 4ENSDARG0000002508916
F1QQC3 / loxl2a / lysyl oxidase-like 2a / LOXL2* / Q9Y4K0* / lysyl oxidase like 2*ENSDARG0000004401016
loxl2b / A1L1V4 / lysyl oxidase-like 2b / LOXL2* / Q9Y4K0* / P58022* / lysyl oxidase like 2* / Lysyl oxidase homolog 2 *ENSDARG0000004407416
si:cabz01100188.1ENSDARG0000010544213
si:dkey-21h14.3ENSDARG0000009604712
si:ch211-150o23.3ENSDARG0000007850210
CT583642.2ENSDARG000001113159
scara5 / Q5RFW0 / scavenger receptor class A, member 5 (putative) / Q8K299* / Q6ZMJ2* / scavenger receptor class A member 5*ENSDARG000000104258
loxa / lysyl oxidase aENSDARG000000032597
loxl1 / lysyl oxidase-like 1 / Q08397*ENSDARG000000544517
marco / macrophage receptor with collagenous structure / Q9UEW3*ENSDARG000000592947
loxl5b / lysyl oxidase-like 5bENSDARG000000769047
loxl5a / lysyl oxidase-like 5aENSDARG000000716806


Protein motifs (from Interpro)
Interpro ID Name
 IPR001190  SRCR domain
 IPR017448  SRCR-like domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006898 receptor-mediated endocytosis IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005044 scavenger receptor activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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