ENSDARG00000078502


Danio rerio

Features
Gene ID: ENSDARG00000078502
  
Biological name :si:ch211-150o23.3
  
Synonyms : si:ch211-150o23.3
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 8
Strand: 1
Band:
Gene start: 17775247
Gene end: 17784723
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000100491
NCBI entrez gene - 799202     See in Manteia.
RefSeq - XM_001339551
RefSeq - XM_021478396
swissprot - B0S5A5
ZFIN ID - ZDB-GENE-060503-479
Ensembl - ENSDARG00000078502
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
loxl2b / A1L1V4 / lysyl oxidase-like 2b / LOXL2* / Q9Y4K0* / P58022* / lysyl oxidase like 2* / Lysyl oxidase homolog 2 *ENSDARG0000004407421
F1QQC3 / loxl2a / lysyl oxidase-like 2a / LOXL2* / Q9Y4K0* / lysyl oxidase like 2*ENSDARG0000004401020
loxl4 / lysyl oxidase-like 4ENSDARG0000002508919
F1RD85 / loxl3a / lysyl oxidase-like 3aENSDARG0000007630619
B8A4W9 / loxl3b / lysyl oxidase-like 3bENSDARG0000003956318
si:cabz01100188.1ENSDARG0000010544215
si:dkey-242e21.3 / CD6* / P30203* / Q61003* / CD6 molecule* / T-cell differentiation antigen CD6 *ENSDARG0000007572313
si:dkey-21h14.3ENSDARG0000009604713
scara5 / Q5RFW0 / scavenger receptor class A, member 5 (putative) / Q8K299* / Q6ZMJ2* / scavenger receptor class A member 5*ENSDARG0000001042511
CT583642.2ENSDARG0000011131511
loxa / lysyl oxidase aENSDARG000000032599
loxl1 / lysyl oxidase-like 1 / Q08397*ENSDARG000000544518
marco / macrophage receptor with collagenous structure / Q9UEW3*ENSDARG000000592948
loxl5a / lysyl oxidase-like 5aENSDARG000000716808
loxl5b / lysyl oxidase-like 5bENSDARG000000769048


Protein motifs (from Interpro)
Interpro ID Name
 IPR001190  SRCR domain
 IPR003599  Immunoglobulin subtype
 IPR007110  Immunoglobulin-like domain
 IPR013783  Immunoglobulin-like fold
 IPR017448  SRCR-like domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006898 receptor-mediated endocytosis IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005044 scavenger receptor activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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