ENSDARG00000105442


Danio rerio

Features
Gene ID: ENSDARG00000105442
  
Biological name :si:cabz01100188.1
  
Synonyms : si:cabz01100188.1
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 11
Strand: -1
Band:
Gene start: 44337157
Gene end: 44347587
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000142512
swissprot - A0A140LGY3
ZFIN ID - ZDB-GENE-160114-30
Ensembl - ENSDARG00000105442
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
loxl4 / lysyl oxidase-like 4ENSDARG0000002508968
B8A4W9 / loxl3b / lysyl oxidase-like 3bENSDARG0000003956352
F1QQC3 / loxl2a / lysyl oxidase-like 2a / LOXL2* / Q9Y4K0* / lysyl oxidase like 2*ENSDARG0000004401052
F1RD85 / loxl3a / lysyl oxidase-like 3aENSDARG0000007630651
loxl2b / A1L1V4 / lysyl oxidase-like 2b / LOXL2* / Q9Y4K0* / P58022* / lysyl oxidase like 2* / Lysyl oxidase homolog 2 *ENSDARG0000004407449
si:dkey-242e21.3 / CD6* / P30203* / Q61003* / CD6 molecule* / T-cell differentiation antigen CD6 *ENSDARG0000007572318
loxl1 / lysyl oxidase-like 1 / Q08397*ENSDARG0000005445115
si:ch211-150o23.3ENSDARG0000007850215
si:dkey-21h14.3ENSDARG0000009604715
loxa / lysyl oxidase aENSDARG0000000325914
scara5 / Q5RFW0 / scavenger receptor class A, member 5 (putative) / Q8K299* / Q6ZMJ2* / scavenger receptor class A member 5*ENSDARG0000001042514
loxl5a / lysyl oxidase-like 5aENSDARG0000007168013
marco / macrophage receptor with collagenous structure / Q9UEW3*ENSDARG0000005929412
loxl5b / lysyl oxidase-like 5bENSDARG0000007690412
CT583642.2ENSDARG0000011131512


Protein motifs (from Interpro)
Interpro ID Name
 IPR001190  SRCR domain
 IPR001695  Lysyl oxidase
 IPR017448  SRCR-like domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006898 receptor-mediated endocytosis IEA
 biological_processGO:0055114 oxidation-reduction process IEA
 cellular_componentGO:0016020 membrane IEA
 molecular_functionGO:0005044 scavenger receptor activity IEA
 molecular_functionGO:0005507 copper ion binding IEA
 molecular_functionGO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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