ENSDARG00000025089


Danio rerio

Features
Gene ID: ENSDARG00000025089
  
Biological name :loxl4
  
Synonyms : loxl4 / lysyl oxidase-like 4
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 13
Strand: -1
Band:
Gene start: 40182487
Gene end: 40238813
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000117086
Ensembl peptide - ENSDARP00000044962
NCBI entrez gene - 100320658     See in Manteia.
RefSeq - XM_002664212
swissprot - F1QJK9
swissprot - B8JL32
ZFIN ID - ZDB-GENE-080722-19
Ensembl - ENSDARG00000025089
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
B8A4W9 / loxl3b / lysyl oxidase-like 3bENSDARG0000003956348
F1QQC3 / loxl2a / lysyl oxidase-like 2a / LOXL2* / Q9Y4K0* / lysyl oxidase like 2*ENSDARG0000004401048
loxl2b / A1L1V4 / lysyl oxidase-like 2b / LOXL2* / Q9Y4K0* / P58022* / lysyl oxidase like 2* / Lysyl oxidase homolog 2 *ENSDARG0000004407447
F1RD85 / loxl3a / lysyl oxidase-like 3aENSDARG0000007630647
si:cabz01100188.1ENSDARG0000010544232
loxl1 / lysyl oxidase-like 1 / Q08397*ENSDARG0000005445118
loxa / lysyl oxidase aENSDARG0000000325917
loxl5b / lysyl oxidase-like 5bENSDARG0000007690417
loxl5a / lysyl oxidase-like 5aENSDARG0000007168016
si:dkey-21h14.3ENSDARG0000009604711
si:dkey-242e21.3 / CD6* / P30203* / Q61003* / CD6 molecule* / T-cell differentiation antigen CD6 *ENSDARG0000007572310
scara5 / Q5RFW0 / scavenger receptor class A, member 5 (putative) / Q8K299* / Q6ZMJ2* / scavenger receptor class A member 5*ENSDARG000000104259
si:ch211-150o23.3ENSDARG000000785029
marco / macrophage receptor with collagenous structure / Q9UEW3*ENSDARG000000592948
CT583642.2ENSDARG000001113155


Protein motifs (from Interpro)
Interpro ID Name
 IPR001190  SRCR domain
 IPR001695  Lysyl oxidase
 IPR017448  SRCR-like domain
 IPR019828  Lysyl oxidase, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006898 receptor-mediated endocytosis IEA
 biological_processGO:0055114 oxidation-reduction process IEA
 cellular_componentGO:0016020 membrane IEA
 molecular_functionGO:0005044 scavenger receptor activity IEA
 molecular_functionGO:0005507 copper ion binding IEA
 molecular_functionGO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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