ENSGALG00000043389


Gallus gallus

Features
Gene ID: ENSGALG00000043389
  
Biological name :PPARGC1B
  
Synonyms : PPARGC1B / PPARG coactivator 1 beta
  
Possible biological names infered from orthology : Peroxisome proliferator-activated receptor gamma coactivator 1-beta / Q86YN6 / Q8VHJ7
  
Species: Gallus gallus
  
Chr. number: 13
Strand: -1
Band:
Gene start: 8380486
Gene end: 8416166
  
Corresponding Affymetrix probe sets: GgaAffx.832.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000047438
NCBI entrez gene - 416148     See in Manteia.
RefSeq - XM_015293713
RefSeq - XM_015293714
RefSeq - XM_015293715
swissprot - A0A1D5P432
Ensembl - ENSGALG00000043389
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ppargc1bENSDARG00000101569Danio rerio
 Q86YN6ENSG00000155846Homo sapiens
 Q8VHJ7ENSMUSG00000033871Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PPARGC1A / peroxisome proliferator-activated receptor gamma coactivator 1-alpha / O70343* / Q9UBK2* / PPARG coactivator 1 alpha*ENSGALG0000004285123
PPRC1 / peroxisome proliferator-activated receptor gamma, coactivator-related 1 / Q5VV67* / Q6NZN1* / Mus musculus peroxisome proliferative activated receptor, gamma, coactivator-related 1 ...ENSGALG0000002074219


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR012677  Nucleotide-binding alpha-beta plait domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001503 ossification IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006390 mitochondrial transcription IEA
 biological_processGO:0007015 actin filament organization IEA
 biological_processGO:0010694 positive regulation of alkaline phosphatase activity IEA
 biological_processGO:0030520 intracellular estrogen receptor signaling pathway IEA
 biological_processGO:0034614 cellular response to reactive oxygen species IEA
 biological_processGO:0042327 positive regulation of phosphorylation IEA
 biological_processGO:0045672 positive regulation of osteoclast differentiation IEA
 biological_processGO:0045780 positive regulation of bone resorption IEA
 biological_processGO:0045892 negative regulation of transcription, DNA-templated IEA
 biological_processGO:0045893 positive regulation of transcription, DNA-templated IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:0060346 bone trabecula formation IEA
 biological_processGO:1903506 regulation of nucleic acid-templated transcription IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0016592 mediator complex IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003712 transcription coregulator activity IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0008134 transcription factor binding IEA
 molecular_functionGO:0030331 estrogen receptor binding IEA
 molecular_functionGO:0030374 nuclear receptor transcription coactivator activity IEA
 molecular_functionGO:0050682 AF-2 domain binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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