ENSDARG00000101569


Danio rerio

Features
Gene ID: ENSDARG00000101569
  
Biological name :ppargc1b
  
Synonyms : peroxisome proliferator-activated receptor gamma, coactivator 1 beta / ppargc1b
  
Possible biological names infered from orthology : PPARG coactivator 1 beta / Q86YN6 / Q8VHJ7
  
Species: Danio rerio
  
Chr. number: 14
Strand: 1
Band:
Gene start: 24934736
Gene end: 25001584
  
Corresponding Affymetrix probe sets: Dr.19928.1.A1_at (Zebrafish Array)   Dr.23701.1.S1_at (Zebrafish Array)   Dr.26307.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000132754
Ensembl peptide - ENSDARP00000148975
NCBI entrez gene - 555906     See in Manteia.
RefSeq - XM_009291061
swissprot - A0A0R4IGS9
ZFIN ID - ZDB-GENE-030616-43
Ensembl - ENSDARG00000101569
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PPARGC1BENSGALG00000043389Gallus gallus
 Q86YN6ENSG00000155846Homo sapiens
 Q8VHJ7ENSMUSG00000033871Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ppargc1a / peroxisome proliferator-activated receptor gamma, coactivator 1 alpha / Q9UBK2* / PPARG coactivator 1 alpha*ENSDARG0000006782920
pprc1 / peroxisome proliferator-activated receptor gamma, coactivator-related 1 / Q5VV67* / Q6NZN1* / Mus musculus peroxisome proliferative activated receptor, gamma, coactivator-related 1 ...ENSDARG0000009033718
si:dkey-93h22.8 / PPRC1* / Q5VV67* / Q6NZN1* / peroxisome proliferator-activated receptor gamma, coactivator-related 1* / Mus musculus peroxisome proliferative activated receptor, gamma, co...ENSDARG0000009866613


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR034605  PGC-1
 IPR034621  Peroxisome proliferator-activated receptor gamma coactivator 1-beta


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007005 mitochondrion organization IEA
 biological_processGO:0050873 brown fat cell differentiation IEA
 biological_processGO:1903506 regulation of nucleic acid-templated transcription IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003712 transcription coregulator activity IEA
 molecular_functionGO:0005102 signaling receptor binding IEA
 molecular_functionGO:0008134 transcription factor binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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