ENSDARG00000067829


Danio rerio

Features
Gene ID: ENSDARG00000067829
  
Biological name :ppargc1a
  
Synonyms : peroxisome proliferator-activated receptor gamma, coactivator 1 alpha / ppargc1a
  
Possible biological names infered from orthology : O70343 / PPARG coactivator 1 alpha / Q9UBK2
  
Species: Danio rerio
  
Chr. number: 7
Strand: -1
Band:
Gene start: 70578985
Gene end: 70665965
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000088481
swissprot - F1QXB5
ZFIN ID - ZDB-GENE-080505-1
Ensembl - ENSDARG00000067829
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PPARGC1AENSGALG00000042851Gallus gallus
 Q9UBK2ENSG00000109819Homo sapiens
 O70343ENSMUSG00000029167Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
pprc1 / peroxisome proliferator-activated receptor gamma, coactivator-related 1 / Q5VV67* / Q6NZN1* / Mus musculus peroxisome proliferative activated receptor, gamma, coactivator-related 1 ...ENSDARG0000009033721
si:dkey-93h22.8 / PPRC1* / Q5VV67* / Q6NZN1* / peroxisome proliferator-activated receptor gamma, coactivator-related 1* / Mus musculus peroxisome proliferative activated receptor, gamma, co...ENSDARG0000009866620
ppargc1b / peroxisome proliferator-activated receptor gamma, coactivator 1 beta / Q86YN6* / Q8VHJ7* / PPARG coactivator 1 beta*ENSDARG0000010156919


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR034605  PGC-1
 IPR034625  Peroxisome proliferator-activated receptor gamma coactivator 1-alpha


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007005 mitochondrion organization IEA
 biological_processGO:0007519 skeletal muscle tissue development IMP
 biological_processGO:0010822 positive regulation of mitochondrion organization IBA
 biological_processGO:0045333 cellular respiration IBA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IBA
 biological_processGO:0046321 positive regulation of fatty acid oxidation IBA
 biological_processGO:0050873 brown fat cell differentiation IEA
 biological_processGO:0051091 positive regulation of DNA-binding transcription factor activity IBA
 cellular_componentGO:0005634 nucleus IBA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003712 transcription coregulator activity IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0005102 signaling receptor binding IEA
 molecular_functionGO:0008134 transcription factor binding IEA
 molecular_functionGO:0030374 nuclear receptor transcription coactivator activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0001056 myotome myotome skeletal muscle cell morphology , abnormal
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 ZFA:0005145 muscle muscle morphology , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000069266 esrra / estrogen-related receptor alpha / O08580* / P11474* / Steroid hormone receptor ERR1 *  / complex






 

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