ENSDARG00000098666


Danio rerio

Features
Gene ID: ENSDARG00000098666
  
Biological name :si:dkey-93h22.8
  
Synonyms : si:dkey-93h22.8
  
Possible biological names infered from orthology : Mus musculus peroxisome proliferative activated receptor, gamma, coactivator-related 1 (Pprc1), transcript variant 2, mRNA. / peroxisome proliferator-activated receptor gamma, coactivator-related 1 / PPRC1 / Q5VV67 / Q6NZN1
  
Species: Danio rerio
  
Chr. number: 11
Strand: 1
Band:
Gene start: 45092866
Gene end: 45107913
  
Corresponding Affymetrix probe sets: Dr.1750.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000134026
NCBI entrez gene - 449943     See in Manteia.
NCBI entrez gene - 110440113     See in Manteia.
RefSeq - NM_001309792
RefSeq - XM_021479927
RefSeq Peptide - NP_001296721
swissprot - A0A0R4IHA5
ZFIN ID - ZDB-GENE-041008-203
Ensembl - ENSDARG00000098666
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PPRC1ENSGALG00000020742Gallus gallus
 PPRC1ENSG00000148840Homo sapiens
 Pprc1ENSMUSG00000055491Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
pprc1 / peroxisome proliferator-activated receptor gamma, coactivator-related 1 / Q5VV67* / Q6NZN1* / Mus musculus peroxisome proliferative activated receptor, gamma, coactivator-related 1 ...ENSDARG0000009033739
ppargc1a / peroxisome proliferator-activated receptor gamma, coactivator 1 alpha / Q9UBK2* / PPARG coactivator 1 alpha*ENSDARG0000006782918
ppargc1b / peroxisome proliferator-activated receptor gamma, coactivator 1 beta / Q86YN6* / Q8VHJ7* / PPARG coactivator 1 beta*ENSDARG0000010156911


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR034597  PGC-1-related coactivator
 IPR034605  PGC-1
 IPR034834  PGC-1-related coactivator, RNA recognition motif


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 biological_processGO:1903506 regulation of nucleic acid-templated transcription IEA
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003712 transcription coregulator activity IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0008134 transcription factor binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr