ENSGALG00000043693


Gallus gallus

Features
Gene ID: ENSGALG00000043693
  
Biological name :ALKBH5
  
Synonyms : ALKBH5 / Gallus gallus alkB homolog 5, RNA demethylase (ALKBH5), mRNA.
  
Possible biological names infered from orthology : alkB homolog 5, RNA demethylase / Q3TSG4 / Q6P6C2 / RNA demethylase ALKBH5
  
Species: Gallus gallus
  
Chr. number: 14
Strand: 1
Band:
Gene start: 5064870
Gene end: 5082428
  
Corresponding Affymetrix probe sets: Gga.11589.2.S1_a_at (Chicken Array)   Gga.8009.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000007966
NCBI entrez gene - 770703     See in Manteia.
RefSeq - NM_001257201
RefSeq - XM_001233462
RefSeq - XM_004945197
RefSeq Peptide - NP_001244130
swissprot - F1NIA5
Ensembl - ENSGALG00000043693
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 alkbh5ENSDARG00000063003Danio rerio
 ALKBH5ENSG00000091542Homo sapiens
 Alkbh5ENSMUSG00000042650Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR027450  Alpha-ketoglutarate-dependent dioxygenase AlkB-like
 IPR032860  RNA demethylase ALKBH5


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001666 response to hypoxia IEA
 biological_processGO:0006397 mRNA processing IBA
 biological_processGO:0006406 mRNA export from nucleus IEA
 biological_processGO:0007283 spermatogenesis IEA
 biological_processGO:0035553 oxidative single-stranded RNA demethylation IBA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0016607 nuclear speck IEA
 molecular_functionGO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors IEA
 molecular_functionGO:0035515 oxidative RNA demethylase activity IBA


Pathways (from Reactome)
Pathway description
Reversal of alkylation damage by DNA dioxygenases


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr