ENSMUSG00000032454


Mus musculus

Features
Gene ID: ENSMUSG00000032454
  
Biological name :Rbp2
  
Synonyms : Q08652 / Rbp2 / retinol binding protein 2, cellular
  
Possible biological names infered from orthology : P50120 / retinol binding protein 2
  
Species: Mus musculus
  
Chr. number: 9
Strand: 1
Band: E3.3
Gene start: 98486115
Gene end: 98509781
  
Corresponding Affymetrix probe sets: 10588043 (MoGene1.0st)   1422846_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000035029
Ensembl peptide - ENSMUSP00000140630
Ensembl peptide - ENSMUSP00000140676
NCBI entrez gene - 19660     See in Manteia.
MGI - MGI:97877
RefSeq - NM_009034
RefSeq Peptide - NP_033060
swissprot - Q059R7
swissprot - Q08652
Ensembl - ENSMUSG00000032454
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rbp2aENSDARG00000070038Danio rerio
 RBP2ENSGALG00000005327Gallus gallus
 RBP2ENSG00000114113Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Rbp7 / Q9EPC5 / retinol binding protein 7, cellular / Q96R05* / retinol binding protein 7*ENSMUSG0000002899656
Rbp1 / Q00915 / retinol binding protein 1, cellular / P09455* / retinol binding protein 1*ENSMUSG0000004640256
Fabp3 / P11404 / Fatty acid-binding protein, heart / P05413* / fatty acid binding protein 3*ENSMUSG0000002877340
Fabp4 / P04117 / Fatty acid-binding protein, adipocyte / P15090* / fatty acid binding protein 4*ENSMUSG0000006251539
Crabp2 / P22935 / Cellular retinoic acid-binding protein 2 / P29373*ENSMUSG0000000488537
Crabp1 / P62965 / Cellular retinoic acid-binding protein 1 / P29762*ENSMUSG0000003229136
Fabp7 / P51880 / Fatty acid-binding protein, brain / O15540* / fatty acid binding protein 7*ENSMUSG0000001987434
Pmp2 / P24526 / peripheral myelin protein 2 / P02689*ENSMUSG0000005246834
Fabp12 / Q9DAK4 / Fatty acid-binding protein 12 / A6NFH5*ENSMUSG0000002753033
Fabp9 / O08716 / Fatty acid-binding protein 9 / Q0Z7S8*ENSMUSG0000002752831
Fabp5 / Q05816 / Fatty acid-binding protein, epidermal / Q01469* / fatty acid binding protein 5*ENSMUSG0000002753331
Gm37389 / FABP9* / Q0Z7S8* / fatty acid binding protein 9*ENSMUSG0000010312422


Protein motifs (from Interpro)
Interpro ID Name
 IPR000463  Cytosolic fatty-acid binding
 IPR000566  Lipocalin/cytosolic fatty-acid binding domain
 IPR012674  Calycin
 IPR031259  Intracellular lipid binding protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001523 retinoid metabolic process TAS
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IEA
 molecular_functionGO:0005501 retinoid binding TAS
 molecular_functionGO:0008289 lipid binding IEA
 molecular_functionGO:0016918 retinal binding IEA
 molecular_functionGO:0019841 retinol binding IEA


Pathways (from Reactome)
Pathway description
Retinoid metabolism and transport


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0001671 abnormal vitamin absorption "anomalous ability to take in any of a group of organic substances, present in food, that are essential to normal metabolism" [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
Show

Allelic Composition: Rad23atm1Jhjh/Rad23atm1Jhjh,Rad23btm1Gvh/Rad23b+
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

 MP:0003718 maternal effect "expression of a phenotypic trait in an female animal s offspring that is dependent on the maternal genotype" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Rad23atm1Jhjh/Rad23atm1Jhjh,Rad23btm1Gvh/Rad23b+
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

 MP:0011234 abnormal retinol level "any anomaly in the concentration of retinol, which plays an essential role in metabolic functioning of the retina, and growth and differentiation" [ISBN:0-683-40008-8]
Show

Allelic Composition: Rad23atm1Jhjh/Rad23atm1Jhjh,Rad23btm1Gvh/Rad23b+
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSMUSG00000066441 Rdh11 / Q9QYF1 / Retinol dehydrogenase 11 / Q8TC12* / retinol dehydrogenase 11 (all-trans/9-cis/11-cis)*  / reaction






 

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